RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 COL26A1Q96A83 441 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 DUS3LQ96G46 650 aaKnown RBP12.62□□□□□ -0.39
NUP188-208ENST00000491502 RBM18Q96H35 190 aaKnown RBP12.62□□□□□ -0.39
NUP188-208ENST00000491502 RNF145Q96MT1 663 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 ZNF681Q96N22 645 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 PIF1Q9H611 641 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 TMEM38AQ9H6F2 299 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 CXorf36Q9H7Y0 433 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 ZNF304Q9HCX3 659 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 PRTFDC1Q9NRG1 225 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 SLC6A13Q9NSD5 602 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 ZCCHC3Q9NUD5 404 aaKnown RBP12.62□□□□□ -0.39
NUP188-208ENST00000491502 HCN3Q9P1Z3 774 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 RPS6KA6Q9UK32 745 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 PADI2Q9Y2J8 665 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 MAP4K5Q9Y4K4 846 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 COL6A6A6NMZ7 2263 aa12.62□□□□□ -0.39
NUP188-208ENST00000491502 ATRXP46100 2492 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 TCRBV3S1A0A5B6 114 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 DHRS12A0PJE2 317 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 DUXAA6NLW8 204 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 PLOD2O00469 737 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 C1QL1O75973 258 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 KRT36O76013 467 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 BAG2O95816 211 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 ATP1B1P05026 303 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 PCGF2P35227 344 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 KHKP50053 298 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 OR4D2P58180 307 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 DSTNP60981 165 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 FOLH1Q04609 750 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 SLC34A1Q06495 639 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 KCNAB2Q13303 367 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 ELOAQ14241 798 aaKnown RBP12.61□□□□□ -0.39
NUP188-208ENST00000491502 PRSS53Q2L4Q9 553 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 FAM98BQ52LJ0 330 aaKnown RBP12.61□□□□□ -0.39
NUP188-208ENST00000491502 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.61□□□□□ -0.39
NUP188-208ENST00000491502 ZNF385CQ66K41 422 aaPredicted RBP12.61□□□□□ -0.39
NUP188-208ENST00000491502 LCN10Q6JVE6 187 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 CYP2R1Q6VVX0 501 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 SZRD1Q7Z422 152 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 RNF130Q86XS8 419 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 SPPL2CQ8IUH8 684 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 OR5T3Q8NGG3 340 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 PEX11GQ96HA9 241 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 SLC35G5Q96KT7 338 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 CSF3RQ99062 836 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 YIPF2Q9BWQ6 316 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 SEMA4CQ9C0C4 833 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 SLC25A18Q9H1K4 315 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 IKZF5Q9H5V7 419 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 MKKSQ9NPJ1 570 aaPredicted RBP12.61□□□□□ -0.39
NUP188-208ENST00000491502 SLAMF7Q9NQ25 335 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 DDX18Q9NVP1 670 aaKnown RBP12.61□□□□□ -0.39
NUP188-208ENST00000491502 C6orf203Q9P0P8 240 aaPredicted RBP12.61□□□□□ -0.39
NUP188-208ENST00000491502 TCFL5Q9UL49 500 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 SAMD4AQ9UPU9 718 aaKnown RBP12.61□□□□□ -0.39
NUP188-208ENST00000491502 ANGPT4Q9Y264 503 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 AP4S1Q9Y587 144 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 PCDHGB3Q9Y5G1 929 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 KCNMB2Q9Y691 235 aa12.61□□□□□ -0.39
NUP188-208ENST00000491502 A0A087WV62 115 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 B8ZZF3 427 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 H0Y3Z8 333 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 HNRNPRO43390 633 aaKnown RBP12.6□□□□□ -0.39
NUP188-208ENST00000491502 KALRNO60229 2985 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 PRKRAO75569 313 aaKnown RBP12.6□□□□□ -0.39
NUP188-208ENST00000491502 PDE9AO76083 593 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 C8orf89P0DMQ9 161 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 BMP2P12643 396 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 GALNSP34059 522 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 XCR1P46094 333 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 GCGRP47871 477 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 CDK9P50750 372 aaKnown RBP12.6□□□□□ -0.39
NUP188-208ENST00000491502 GZMMP51124 257 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 MRPS22P82650 360 aaKnown RBP12.6□□□□□ -0.39
NUP188-208ENST00000491502 CHRNB3Q05901 458 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 NCF4Q15080 339 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 NKAIN1Q4KMZ8 207 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 ATAD3BQ5T9A4 648 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 ATP1A1-AS1Q5TC04 95 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 MLIPQ5VWP3 458 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 ZCCHC12Q6PEW1 402 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 FAM198BQ6UWH4 519 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 ZNF605Q86T29 641 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 APLFQ8IW19 511 aaPredicted RBP12.6□□□□□ -0.39
NUP188-208ENST00000491502 ST13P4Q8IZP2 240 aaPredicted RBP12.6□□□□□ -0.39
NUP188-208ENST00000491502 DTWD1Q8N5C7 304 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 OR5AK3PQ8NH89 298 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 SUN3Q8TAQ9 357 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 PNPT1Q8TCS8 783 aaKnown RBP12.6□□□□□ -0.39
NUP188-208ENST00000491502 ZNF675Q8TD23 568 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 PYDC1Q8WXC3 89 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 ELP4Q96EB1 424 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 IP6K3Q96PC2 410 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 TRIM8Q9BZR9 551 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 EPS8L2Q9H6S3 715 aa12.6□□□□□ -0.39
NUP188-208ENST00000491502 SIRT3Q9NTG7 399 aaPredicted RBP12.6□□□□□ -0.39
NUP188-208ENST00000491502 CCM2LQ9NUG4 571 aaPredicted RBP12.6□□□□□ -0.39
NUP188-208ENST00000491502 OLAHQ9NV23 265 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms