RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TLDC2A0PJX2 215 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 PPM1BO75688 479 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 PTGER4P35408 488 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 GSTM5P46439 218 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 NUP107P57740 925 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 VSNL1P62760 191 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 PMPCAQ10713 525 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 LIPMQ5VYY2 423 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 SAMD14Q8IZD0 417 aaPredicted RBP28.76■■■□□ 2.19
LDB1-204ENST00000490751 OR9A2Q8NGT5 310 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 CDC26Q8NHZ8 85 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 ASB5Q8WWX0 329 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 HSPBAP1Q96EW2 488 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 SLC6A15Q9H2J7 730 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 ACKR4Q9NPB9 350 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 MID2Q9UJV3 735 aa28.76■■■□□ 2.19
LDB1-204ENST00000490751 FREM3P0C091 2139 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 SNX4O95219 450 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 ABCB1P08183 1280 aaPredicted RBP28.75■■■□□ 2.19
LDB1-204ENST00000490751 NAGAP17050 411 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 GDF1P27539 372 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 CASP3P42574 277 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 KIR3DL1P43629 444 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 EMDP50402 254 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 ZNF763Q0D2J5 394 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 WLSQ5T9L3 541 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 ACAD11Q709F0 780 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 TRIM46Q7Z4K8 759 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 OMA1Q96E52 524 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 ANKRA2Q9H9E1 313 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 SLC35C2Q9NQQ7 365 aa28.75■■■□□ 2.19
LDB1-204ENST00000490751 ACOX3O15254 700 aa28.74■■■□□ 2.19
LDB1-204ENST00000490751 CHRNB4P30926 498 aa28.74■■■□□ 2.19
LDB1-204ENST00000490751 MASP1P48740 699 aa28.74■■■□□ 2.19
LDB1-204ENST00000490751 TRPC1P48995 793 aa28.74■■■□□ 2.19
LDB1-204ENST00000490751 DCAF7P61962 342 aa28.74■■■□□ 2.19
LDB1-204ENST00000490751 PLCXD2Q0VAA5 305 aa28.74■■■□□ 2.19
LDB1-204ENST00000490751 C10orf107Q8IVU9 208 aa28.74■■■□□ 2.19
LDB1-204ENST00000490751 SRRM1Q8IYB3 904 aaKnown RBP28.74■■■□□ 2.19
LDB1-204ENST00000490751 LIX1Q8N485 282 aa28.74■■■□□ 2.19
LDB1-204ENST00000490751 KAT2AQ92830 837 aa28.74■■■□□ 2.19
LDB1-204ENST00000490751 EHD3Q9NZN3 535 aa28.74■■■□□ 2.19
LDB1-204ENST00000490751 POLR3HQ9Y535 204 aaPredicted RBP28.74■■■□□ 2.19
LDB1-204ENST00000490751 FAM215AQ9Y5M1 114 aa28.74■■■□□ 2.19
LDB1-204ENST00000490751 UROSP10746 265 aa28.73■■■□□ 2.19
LDB1-204ENST00000490751 PPICP45877 212 aa28.73■■■□□ 2.19
LDB1-204ENST00000490751 C2orf80Q0P641 193 aa28.73■■■□□ 2.19
LDB1-204ENST00000490751 PCLAFQ15004 111 aa28.73■■■□□ 2.19
LDB1-204ENST00000490751 CEBPEQ15744 281 aa28.73■■■□□ 2.19
LDB1-204ENST00000490751 DESI1Q6ICB0 168 aa28.73■■■□□ 2.19
LDB1-204ENST00000490751 B3GNT6Q6ZMB0 384 aa28.73■■■□□ 2.19
LDB1-204ENST00000490751 GDF7Q7Z4P5 450 aa28.73■■■□□ 2.19
LDB1-204ENST00000490751 PACS2Q86VP3 889 aa28.73■■■□□ 2.19
LDB1-204ENST00000490751 CCDC71Q8IV32 467 aaPredicted RBP28.73■■■□□ 2.19
LDB1-204ENST00000490751 NEIL3Q8TAT5 605 aa28.73■■■□□ 2.19
LDB1-204ENST00000490751 RRAGDQ9NQL2 400 aaPredicted RBP28.73■■■□□ 2.19
LDB1-204ENST00000490751 WDR1O75083 606 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 BCAS2O75934 225 aaPredicted RBP28.72■■■□□ 2.19
LDB1-204ENST00000490751 RSL1D1O76021 490 aaKnown RBP28.72■■■□□ 2.19
LDB1-204ENST00000490751 NUDT17P0C025 328 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 DDCP20711 480 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 DRD5P21918 477 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 FNDC7Q5VTL7 733 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 CLEC6AQ6EIG7 209 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 RTL6Q6ICC9 239 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 NUP54Q7Z3B4 507 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 FAM9CQ8IZT9 166 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 RIBC1Q8N443 379 aaPredicted RBP28.72■■■□□ 2.19
LDB1-204ENST00000490751 HGDQ93099 445 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 ERP27Q96DN0 273 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 TMEM41AQ96HV5 264 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 APOPT1Q96IL0 206 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 TTYH2Q9BSA4 534 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 IQCGQ9H095 443 aaKnown RBP28.72■■■□□ 2.19
LDB1-204ENST00000490751 METTL7AQ9H8H3 244 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 ALKBH4Q9NXW9 302 aa28.72■■■□□ 2.19
LDB1-204ENST00000490751 FRG2CA6NGY1 282 aa28.71■■■□□ 2.19
LDB1-204ENST00000490751 FAM90A27PA6NNH2 459 aa28.71■■■□□ 2.19
LDB1-204ENST00000490751 C1orf185Q5T7R7 199 aa28.71■■■□□ 2.19
LDB1-204ENST00000490751 LILRB4Q8NHJ6 448 aa28.71■■■□□ 2.19
LDB1-204ENST00000490751 GNRHR2Q96P88 292 aa28.71■■■□□ 2.19
LDB1-204ENST00000490751 BBS4Q96RK4 519 aa28.71■■■□□ 2.19
LDB1-204ENST00000490751 NODALQ96S42 347 aa28.71■■■□□ 2.19
LDB1-204ENST00000490751 GATA5Q9BWX5 397 aaPredicted RBP28.71■■■□□ 2.19
LDB1-204ENST00000490751 MKS1Q9NXB0 559 aa28.71■■■□□ 2.19
LDB1-204ENST00000490751 SENP1Q9P0U3 644 aa28.71■■■□□ 2.19
LDB1-204ENST00000490751 GPR55Q9Y2T6 319 aaPredicted RBP28.71■■■□□ 2.19
LDB1-204ENST00000490751 C15orf41Q9Y2V0 281 aa28.71■■■□□ 2.19
LDB1-204ENST00000490751 TO15178 435 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 NME6O75414 186 aaPredicted RBP28.7■■■□□ 2.18
LDB1-204ENST00000490751 TRAPPC6AO75865 159 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 GLI4P10075 376 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 MPIP34949 423 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 ERCC6LQ2NKX8 1250 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 FAM71E1Q6IPT2 247 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 TRABD2AQ86V40 505 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 OR10Q1Q8NGQ4 319 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 FAM76AQ8TAV0 307 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 PUM2Q8TB72 1066 aaKnown RBP eCLIP28.7■■■□□ 2.18
LDB1-204ENST00000490751 NTNG2Q96CW9 530 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms