RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 LIX1LQ8IVB5 337 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 GPALPP1Q8IXQ4 340 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 C1orf52Q8N6N3 182 aaKnown RBP6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 CEP112Q8N8E3 955 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 CDYL2Q8N8U2 506 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 OR4K14Q8NGD5 310 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 KIF18AQ8NI77 898 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 NUBPLQ8TB37 319 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 CHTF18Q8WVB6 975 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 ADIPOR1Q96A54 375 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 REPS1Q96D71 796 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 APIPQ96GX9 242 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 FBXL20Q96IG2 436 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 TMEM237Q96Q45 408 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 GAL3ST4Q96RP7 486 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 VKORC1Q9BQB6 163 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 FAM173AQ9BQD7 235 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 WWTR1Q9GZV5 400 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 OR10A5Q9H207 317 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 ZDHHC11Q9H8X9 412 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 IL1RL2Q9HB29 575 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 SACM1LQ9NTJ5 587 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 MS4A12Q9NXJ0 267 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 ALKBH4Q9NXW9 302 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 RNF6Q9Y252 685 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 PCDHA9Q9Y5H5 950 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 KLF2Q9Y5W3 355 aaPredicted RBP6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 IKBKGQ9Y6K9 419 aa6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.72□□□□□ -1.33
PRPF4B-208ENST00000490653 KIAA1549Q9HCM3 1950 aa6.71□□□□□ -1.33
PRPF4B-208ENST00000490653 HCFC1P51610 2035 aa6.71□□□□□ -1.33
PRPF4B-208ENST00000490653 PHF3Q92576 2039 aaKnown RBP6.71□□□□□ -1.33
PRPF4B-208ENST00000490653 PCNX3Q9H6A9 2034 aa6.71□□□□□ -1.33
PRPF4B-208ENST00000490653 C2orf92A0A1B0GVN3 265 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 CCDC189A1A4V9 331 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 MEGF11A6BM72 1044 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 G3V2L1 256 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 ERAL1O75616 437 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 SEMA3DO95025 777 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 MLYCDO95822 493 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 IGHG3P01860 377 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 P04436 131 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 ABHD2P08910 425 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 CPMP14384 443 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 COX7A2P14406 83 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 IMPDH1P20839 514 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 CNTFP26441 200 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 PIK3R1P27986 724 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 SLCO1A2P46721 670 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 ARFIP1P53367 373 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 PRKAA2P54646 552 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 PHEXP78562 749 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 PLIN5Q00G26 463 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 HMGCS1Q01581 520 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 FUT7Q11130 342 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 IFT88Q13099 833 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 SNTB1Q13884 538 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 SLC10A1Q14973 349 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 NNATQ16517 81 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 SPRED3Q2MJR0 410 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 PRICKLE4Q2TBC4 344 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 GGTA1PQ4G0N0 100 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 FNDC7Q5VTL7 733 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 METTL2BQ6P1Q9 378 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 FDX2Q6P4F2 183 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 RPTNQ6XPR3 784 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 SEM1Q6ZVN7 128 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 CBLL1Q75N03 491 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 TRMT10CQ7L0Y3 403 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 IFT20Q8IY31 132 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 ACBD4Q8NC06 268 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 FAM13CQ8NE31 585 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 PAQR8Q8TEZ7 354 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 PHF10Q8WUB8 498 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 SPACA9Q96E40 222 aaPredicted RBP6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 CNRIP1Q96F85 164 aaPredicted RBP6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 SGCZQ96LD1 299 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 JSRP1Q96MG2 331 aaPredicted RBP6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 ZNF681Q96N22 645 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 CENPKQ9BS16 269 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 C1QTNF3Q9BXJ4 246 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 SHCBP1LQ9BZQ2 653 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 BRINP2Q9C0B6 783 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 TSPYL1Q9H0U9 437 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 NXF5Q9H1B4 397 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 SLC6A15Q9H2J7 730 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 GSTO2Q9H4Y5 243 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 ELOVL6Q9H5J4 265 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 MAT2BQ9NZL9 334 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 COPS7AQ9UBW8 275 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 TRPS1Q9UHF7 1281 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 ZNF639Q9UID6 485 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 FAM215AQ9Y5M1 114 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 NPFFR2Q9Y5X5 522 aa6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 CHCHD2Q9Y6H1 151 aaPredicted RBP6.71□□□□□ -1.34
PRPF4B-208ENST00000490653 FBN3Q75N90 2809 aa6.7□□□□□ -1.34
PRPF4B-208ENST00000490653 A0A1B0GVC2 190 aa6.7□□□□□ -1.34
PRPF4B-208ENST00000490653 FAM90A27PA6NNH2 459 aa6.7□□□□□ -1.34
PRPF4B-208ENST00000490653 C17orf51A8MQB3 221 aa6.7□□□□□ -1.34
PRPF4B-208ENST00000490653 TRIM3O75382 744 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms