RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CHEK1O14757 476 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 GMFGO60234 142 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 HSF2BPO75031 334 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 SRSF10O75494 262 aaKnown RBP3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 TXNDC12O95881 172 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 HSPA5P11021 654 aaKnown RBP3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 ETS1P14921 441 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 UGT1A6P19224 532 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 BCL3P20749 454 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 ACADSBP45954 432 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 ASMTP46597 345 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 ATP5OP48047 213 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 TRPC1P48995 793 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 GBX2P52951 348 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 HERV-K104P63124 156 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 CCNA1P78396 465 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 RIPK1Q13546 671 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 SNX1Q13596 522 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 ABRAXAS2Q15018 415 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 PCK2Q16822 640 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 UNC50Q53HI1 259 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 CDC42EP5Q6NZY7 148 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 ANGPTL8Q6UXH0 198 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 ASRGL1Q7L266 308 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 ITIH5Q86UX2 942 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 SERINC5Q86VE9 423 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 SERPINA12Q8IW75 414 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 LINC00518Q8N0U6 118 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 KDM8Q8N371 416 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 ARL14Q8N4G2 192 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 CHDHQ8NE62 594 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 RNF139Q8WU17 664 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 THRSPQ92748 146 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 RAB7BQ96AH8 199 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 COG3Q96JB2 828 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 GSDMAQ96QA5 445 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 APOL2Q9BQE5 337 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 DNAJC11Q9NVH1 559 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 NMRK1Q9NWW6 199 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 TMOD2Q9NZR1 351 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 HMG20BQ9P0W2 317 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 SPASTQ9UBP0 616 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 NARFQ9UHQ1 456 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 TP53TG3Q9ULZ0 132 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 DIMT1Q9UNQ2 313 aaKnown RBP3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 SLC9A8Q9Y2E8 581 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 TMED5Q9Y3A6 229 aa3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 STRAPQ9Y3F4 350 aaKnown RBP3.8□□□□□ -1.8
HMGB1P38-201ENST00000490557 FGD5Q6ZNL6 1462 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 AFF2P51816 1311 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 IGLV3-10A0A075B6K4 115 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 C5orf51A6NDU8 294 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 ZNF487B1APH4 448 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 ZNF354AO60765 605 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 AKR7A3O95154 331 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 MT-ATP6P00846 226 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 SERPINF2P08697 491 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 NCF1P14598 390 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 AREGP15514 252 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 AHCYP23526 432 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 RPA1P27694 616 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 MARCKSP29966 332 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 GDI1P31150 447 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 UCP2P55851 309 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 BEX3Q00994 111 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 DMTNQ08495 405 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 ELP6Q0PNE2 266 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 CUL2Q13617 745 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 RUNX3Q13761 415 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 GAMTQ14353 236 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 PPP1R7Q15435 360 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 IMMTQ16891 758 aaKnown RBP3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 GPAT3Q53EU6 434 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 RNLSQ5VYX0 342 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 STEAP1BQ6NZ63 245 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 RFWD3Q6PCD5 774 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 Q6ZR54 194 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 TAF8Q7Z7C8 310 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 UNC5CLQ8IV45 518 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 LINC00612Q8N6U2 182 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 OR56B2PQ8NGI1 322 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 TYMSOSQ8TAI1 123 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 RDH11Q8TC12 318 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 ZPLD1Q8TCW7 415 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 RNASE8Q8TDE3 154 aaKnown RBP3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 SLC5A11Q8WWX8 675 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 THUMPD2Q9BTF0 503 aaKnown RBP3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 CARD6Q9BX69 1037 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 RIBC2Q9H4K1 309 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 RNF41Q9H4P4 317 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 DCTPP1Q9H773 170 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 IL1RL2Q9HB29 575 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 TM9SF3Q9HD45 589 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 RBM28Q9NW13 759 aaKnown RBP3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 CLEC5AQ9NY25 188 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 HOXC10Q9NYD6 342 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 ARMCX1Q9P291 453 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 ABCD2Q9UBJ2 740 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 CIDEBQ9UHD4 219 aa3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 CCPG1Q9ULG6 757 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms