RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 GPR137Q96N19 417 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 ZNF578Q96N58 590 aaPredicted RBP3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 NEDD4LQ96PU5 975 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 TRNT1Q96Q11 434 aaKnown RBP3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 VPS35Q96QK1 796 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 MCCC1Q96RQ3 725 aaPredicted RBP3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 ZBTB18Q99592 522 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 EPYCQ99645 322 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 BARD1Q99728 777 aaKnown RBP3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 SOSTQ9BQB4 213 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 TTYH2Q9BSA4 534 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 COPS4Q9BT78 406 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 CENPOQ9BU64 300 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 MED18Q9BUE0 208 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 TRIM62Q9BVG3 475 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 C1QTNF7Q9BXJ2 289 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 SLC46A2Q9BY10 475 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 ZNF717Q9BY31 904 aaPredicted RBP3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 C6orf62Q9GZU0 229 aaPredicted RBP3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 ZBP1Q9H171 429 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 SLC25A51Q9H1U9 297 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 RIBC2Q9H4K1 309 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 CLMPQ9H6B4 373 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 SERHLQ9NQF3 203 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 DMRT3Q9NQL9 472 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 PRDM8Q9NQV8 689 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 OLA1Q9NTK5 396 aaKnown RBP3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 DDX28Q9NUL7 540 aaKnown RBP3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 EXD2Q9NVH0 621 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 C14orf119Q9NWQ9 140 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 TMEM161AQ9NX61 479 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 NUDT4Q9NZJ9 180 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 CNOT2Q9NZN8 540 aaKnown RBP3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 SH3BP4Q9P0V3 963 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 NCDNQ9UBB6 729 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 DPP7Q9UHL4 492 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 TRMT6Q9UJA5 497 aaKnown RBP3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 UTS2RQ9UKP6 389 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 IKZF3Q9UKT9 509 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 ELF5Q9UKW6 265 aaPredicted RBP3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 SAMD4AQ9UPU9 718 aaKnown RBP3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 LSM2Q9Y333 95 aaKnown RBP3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 GMPPBQ9Y5P6 360 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 V9GYQ6 96 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 LAMA2P24043 3122 aaKnown RBP3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 LAMA3Q16787 3333 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 FANCMQ8IYD8 2048 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 LOC285095A0A1B0GVY8 99 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 A0A1W2PQ72 361 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 RPS10-NUDT3A0A1W2PQS6 291 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 ARRDC5A6NEK1 342 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 EFCAB10A6NFE3 127 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 TUBAL3A6NHL2 446 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 SLC38A8A6NNN8 435 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 SUPT3HB4E1H0 165 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 ZNF670-ZNF695F2Z2N8 137 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 IRAK2O43187 625 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 KIAA0513O60268 411 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 HCN1O60741 890 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 NOS1APO75052 506 aaPredicted RBP3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 GPX5O75715 221 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 RPP40O75818 363 aaKnown RBP3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 FGF18O76093 207 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 CCNDBP1O95273 360 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 PRAMEF12O95522 483 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 NUDT3O95989 172 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 MT-CYBP00156 380 aaPredicted RBP3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 SERPINA1P01009 418 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 PTHP01270 115 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 EPOP01588 193 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 C9P02748 559 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 MMP2P08253 660 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 CNPP09543 421 aaKnown RBP3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 SLC2A3P11169 496 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 G6PDP11413 515 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 CYP2A6P11509 494 aaPredicted RBP3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 PRKACGP22612 351 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 PRPH2P23942 346 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 IL32P24001 234 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 MYL9P24844 172 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 PTBP1P26599 531 aaKnown RBP eCLIP3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 EPHA2P29317 976 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 PRDX3P30048 256 aaKnown RBP3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 SOX6P35712 828 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 PPM1AP35813 382 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 HMGCLP35914 325 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 RAD52P43351 418 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 HK3P52790 923 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 DGKQP52824 942 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 CLDN20P56880 219 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 NRG3P56975 720 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 RAB25P57735 213 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 ERVPABLB-1P60509 514 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 RPP38P78345 283 aaKnown RBP3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 ZXDBP98169 803 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 SRSF2Q01130 221 aaKnown RBP3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 RHAGQ02094 409 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 SEMG2Q02383 582 aa3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 YWHAHQ04917 246 aaPredicted RBP3.26□□□□□ -1.89
CRNKL1-203ENST00000490258 SCN1BQ07699 218 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms