RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 YAF2Q8IY57 180 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 QRFPRQ96P65 431 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 MUTYHQ9UIF7 546 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 SPIN1Q9Y657 262 aaPredicted RBP14.79□□□□□ -0.04
BRD9-208ENST00000489816 MYL12BO14950 172 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 SEMA3DO95025 777 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 EIF2S1P05198 315 aaKnown RBP14.79□□□□□ -0.04
BRD9-208ENST00000489816 ASGR2P07307 311 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 NTSP30990 170 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 GIPRP48546 466 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 TAS2R41P59536 307 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 TFF2Q03403 129 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 EIF4HQ15056 248 aaKnown RBP14.79□□□□□ -0.04
BRD9-208ENST00000489816 TYW3Q6IPR3 259 aaKnown RBP14.79□□□□□ -0.04
BRD9-208ENST00000489816 SFTPA2Q8IWL1 248 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 SUN3Q8TAQ9 357 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 MS4A6EQ96DS6 147 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 TMEM80Q96HE8 168 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 ART5Q96L15 291 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 FGF22Q9HCT0 170 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 MAN2C1Q9NTJ4 1040 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 TMEM74BQ9NUR3 256 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 SEC16AO15027 2179 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 A0A0A6YYD5 115 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 MAN2B1O00754 1011 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 CDRT1O95170 752 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 CEACAM5P06731 702 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 FUT1P19526 365 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 HIST1H1TP22492 207 aaPredicted RBP14.79□□□□□ -0.04
BRD9-208ENST00000489816 NR4A2P43354 598 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 GPR4P46093 362 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 PXNP49023 591 aaPredicted RBP14.79□□□□□ -0.04
BRD9-208ENST00000489816 RPA4Q13156 261 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 SELENBP1Q13228 472 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 FBXO43Q4G163 708 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 GDPD3Q7L5L3 318 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 ZNF367Q7RTV3 350 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 PRICKLE2Q7Z3G6 844 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 KIAA1958Q8N8K9 716 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 FGF14Q92915 247 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 TSACCQ96A04 125 aaPredicted RBP14.79□□□□□ -0.04
BRD9-208ENST00000489816 C1GALT1C1Q96EU7 318 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 NEDD4LQ96PU5 975 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 CDCA4Q9BXL8 241 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 DDX31Q9H8H2 851 aaKnown RBP14.79□□□□□ -0.04
BRD9-208ENST00000489816 PELI2Q9HAT8 420 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 THAP10Q9P2Z0 257 aaPredicted RBP14.79□□□□□ -0.04
BRD9-208ENST00000489816 MALT1Q9UDY8 824 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 APOBEC3BQ9UH17 382 aaKnown RBP14.79□□□□□ -0.04
BRD9-208ENST00000489816 MGAT4BQ9UQ53 548 aa14.79□□□□□ -0.04
BRD9-208ENST00000489816 A0A087WUU8 490 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 SLC35F4A4IF30 521 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 PDE9AO76083 593 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 SNX4O95219 450 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 UGT2B10P36537 528 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 RAB15P59190 212 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 SIM1P81133 766 aaPredicted RBP14.78□□□□□ -0.04
BRD9-208ENST00000489816 ZNF311Q5JNZ3 666 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 TJAP1Q5JTD0 557 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 RRM2BQ7LG56 351 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 OR10G6Q8NH81 332 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 ZFPM2Q8WW38 1151 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 CRELD1Q96HD1 420 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 RACGAP1Q9H0H5 632 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 ABCB9Q9NP78 766 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 PHPT1Q9NRX4 125 aaPredicted RBP14.78□□□□□ -0.04
BRD9-208ENST00000489816 SLC9A8Q9Y2E8 581 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 NPIPA5A0A0B4J1W7 369 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 FAM183AA6NL82 134 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 NPIPA7E9PJI5 369 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 FAAHO00519 579 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 MRPS14O60783 128 aaKnown RBP14.78□□□□□ -0.04
BRD9-208ENST00000489816 TP53P04637 393 aaPredicted RBP14.78□□□□□ -0.04
BRD9-208ENST00000489816 NPIPA8P0DM63 369 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 PSMA1P25786 263 aaKnown RBP14.78□□□□□ -0.04
BRD9-208ENST00000489816 PEBP1P30086 187 aaKnown RBP14.78□□□□□ -0.04
BRD9-208ENST00000489816 MAN2A2P49641 1150 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 HYAL2Q12891 473 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 SYT14P1Q58G82 188 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 C9orf50Q5SZB4 431 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 AGAP7PQ5VUJ5 663 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 SLC16A11Q8NCK7 471 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 NLGN4YQ8NFZ3 816 aaPredicted RBP14.78□□□□□ -0.04
BRD9-208ENST00000489816 HDAC8Q9BY41 377 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 SLC25A19Q9HC21 320 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 PRDM7Q9NQW5 492 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 SLC13A4Q9UKG4 626 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 ENTPD4Q9Y227 616 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 DSPPQ9NZW4 1301 aa14.78□□□□□ -0.04
BRD9-208ENST00000489816 LINC01565O15544 149 aa14.77□□□□□ -0.04
BRD9-208ENST00000489816 ATP5A1P25705 553 aaKnown RBP14.77□□□□□ -0.04
BRD9-208ENST00000489816 TRHRP34981 398 aaPredicted RBP14.77□□□□□ -0.04
BRD9-208ENST00000489816 DEFB134Q4QY38 66 aa14.77□□□□□ -0.04
BRD9-208ENST00000489816 SLX4IPQ5VYV7 408 aa14.77□□□□□ -0.04
BRD9-208ENST00000489816 KIAA1161Q6NSJ0 714 aa14.77□□□□□ -0.04
BRD9-208ENST00000489816 ABHD17CQ6PCB6 329 aa14.77□□□□□ -0.04
BRD9-208ENST00000489816 PARM1Q6UWI2 310 aa14.77□□□□□ -0.04
BRD9-208ENST00000489816 ZNF730Q6ZMV8 503 aa14.77□□□□□ -0.04
BRD9-208ENST00000489816 KIF18BQ86Y91 864 aa14.77□□□□□ -0.04
BRD9-208ENST00000489816 NKAIN4Q8IVV8 208 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms