RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 USP9YO00507 2555 aaPredicted RBP9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 PRRC2CQ9Y520 2896 aaKnown RBP9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 TRBV11-1A0A0K0K1C0 115 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 A0A1B0GUH1 482 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 GLOD5A6NK44 160 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 NEURL1O76050 574 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 LDLRP01130 860 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 IFNA16P05015 189 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 STSP08842 583 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 NR2F6P10588 404 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 COX4I1P13073 169 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 DRD2P14416 443 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 PTPN6P29350 595 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 TRHRP34981 398 aaPredicted RBP9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 CYB561P49447 251 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 POLR2JP52435 117 aaKnown RBP9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 STX1BP61266 288 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 MXRA7P84157 204 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 STX4Q12846 297 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 SERTAD2Q14140 314 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 CEBPEQ15744 281 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 FAM174BQ3ZCQ3 159 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 SPINK14Q6IE38 97 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 SLC25A25Q6KCM7 469 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 GFRALQ6UXV0 394 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 SNX32Q86XE0 403 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 TICAM1Q8IUC6 712 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 FAM9CQ8IZT9 166 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 POU5F2Q8N7G0 328 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 GLB1L3Q8NCI6 653 aaPredicted RBP9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 OR8J2Q8NGG1 315 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 CDC26Q8NHZ8 85 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 DAZLQ92904 295 aaKnown RBP9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 VPS33AQ96AX1 596 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 ANKRD9Q96BM1 317 aaPredicted RBP9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 MTERF3Q96E29 417 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 ZNF681Q96N22 645 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 TRIM45Q9H8W5 580 aaPredicted RBP9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 SERHLQ9NQF3 203 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 KLHL1Q9NR64 748 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 MS4A12Q9NXJ0 267 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 ANKRD10Q9NXR5 420 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 EHD3Q9NZN3 535 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 LRFN1Q9P244 771 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 PLEKHB1Q9UF11 243 aaPredicted RBP9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 BCAP29Q9UHQ4 241 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 PHF11Q9UIL8 331 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 CLCA3PQ9Y6N3 262 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 POLEQ07864 2286 aa9.8□□□□□ -0.84
SCAMP4-208ENST00000489554 C1orf226A1L170 272 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 B2RBV5 119 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 NR5A2O00482 541 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 LRRTM2O43300 516 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 FGF17O60258 216 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 SLC25A12O75746 678 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 CIB2O75838 187 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 SP1P08047 785 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 SNRPB2P08579 225 aaKnown RBP9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 RNF224P0DH78 156 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 CPN2P22792 545 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 PPP2R1BP30154 601 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 HLCSP50747 726 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 GPR143P51810 404 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 CLNS1AP54105 237 aaKnown RBP9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 IGLV3-21P80748 117 aaPredicted RBP9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 BIKQ13323 160 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 HEPACAMQ14CZ8 416 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 RPS6KA2Q15349 733 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 ZNF750Q32MQ0 723 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 VPS26BQ4G0F5 336 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 TIGD2Q4W5G0 525 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 PAGE3Q5JUK9 113 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 OR4F3Q6IEY1 312 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 FAM180BQ6P0A1 224 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 MORN4Q8NDC4 146 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 OR14A16Q8NHC5 309 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 FBXO27Q8NI29 283 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 RP9Q8TA86 221 aaKnown RBP9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 TSPEARQ8WU66 669 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 NCLNQ969V3 563 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 TMEM125Q96AQ2 219 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 CIDECQ96AQ7 238 aaPredicted RBP9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 SLC7A6OSQ96CW6 309 aaPredicted RBP9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 SPDL1Q96EA4 605 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 CNRIP1Q96F85 164 aaPredicted RBP9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 ALOXE3Q9BYJ1 711 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 SEC14L3Q9UDX4 400 aa9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 SPTAN1Q13813 2472 aaKnown RBP9.79□□□□□ -0.84
SCAMP4-208ENST00000489554 HIVEP3Q5T1R4 2406 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 CROCCQ5TZA2 2017 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 TRBV5-3A0A0A0MS03 114 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 LOC100653049A0A140TA62 436 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 A0A1W2PP18 115 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 MYO1GB0I1T2 1018 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 FXYD1O00168 92 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 GSC2O15499 205 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 NME2P1O60361 137 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 KRT34O76011 436 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 ZFAND5O76080 213 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms