RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 PCTPQ9UKL6 214 aa11.3□□□□□ -0.6
CPSF3-204ENST00000489403 CES1P1Q9UKY3 287 aa11.3□□□□□ -0.6
CPSF3-204ENST00000489403 MAPRE3Q9UPY8 281 aa11.3□□□□□ -0.6
CPSF3-204ENST00000489403 RPH3AQ9Y2J0 694 aaPredicted RBP11.3□□□□□ -0.6
CPSF3-204ENST00000489403 PCDHA9Q9Y5H5 950 aa11.3□□□□□ -0.6
CPSF3-204ENST00000489403 MED12Q93074 2177 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 A0A1B0GTL3 188 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 ESYT3A0FGR9 886 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 C1orf226A1L170 272 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 ICOSLGO75144 302 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 ERAL1O75616 437 aaKnown RBP11.29□□□□□ -0.6
CPSF3-204ENST00000489403 CBX7O95931 251 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 IL18BPO95998 194 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 ACTL6AO96019 429 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 ATP1B1P05026 303 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 RHOXF2BP0C7M4 288 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 TMIGD3P0DMS9 266 aaPredicted RBP11.29□□□□□ -0.6
CPSF3-204ENST00000489403 NAGAP17050 411 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 FEN1P39748 380 aaKnown RBP11.29□□□□□ -0.6
CPSF3-204ENST00000489403 MAPK12P53778 367 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 DUSP2Q05923 314 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 PLCXD2Q0VAA5 305 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 MGAT2Q10469 447 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 MAP4K2Q12851 820 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 FOXF2Q12947 444 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 IFT88Q13099 833 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 RCAN2Q14206 197 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 DEFB113Q30KQ7 82 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 GGTA1PQ4G0N0 100 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 FAM219BQ5XKK7 198 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 SLC30A6Q6NXT4 461 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 RPS27LQ71UM5 84 aaKnown RBP11.29□□□□□ -0.6
CPSF3-204ENST00000489403 PAGE2Q7Z2X7 111 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 OR4F6Q8NGB9 312 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 ZPLD1Q8TCW7 415 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 LCORQ96JN0 433 aaPredicted RBP11.29□□□□□ -0.6
CPSF3-204ENST00000489403 TUBA1CQ9BQE3 449 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 FARSBQ9NSD9 589 aaKnown RBP11.29□□□□□ -0.6
CPSF3-204ENST00000489403 AHSPQ9NZD4 102 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 EHD3Q9NZN3 535 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 XPR1Q9UBH6 696 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 BCAP29Q9UHQ4 241 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 CFL2Q9Y281 166 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 PLLPQ9Y342 182 aa11.29□□□□□ -0.6
CPSF3-204ENST00000489403 ABCA4P78363 2273 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 GOLGA6L10A6NI86 522 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 CLCA1A8K7I4 914 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 STX16-NPEPL1H3BU86 382 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 STX16O14662 325 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 UGT2B11O75310 529 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 GOSR1O95249 250 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 CYP4B1P13584 511 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 CPN1P15169 458 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 CNTFP26441 200 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 MAGEA12P43365 314 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 SLC7A5Q01650 507 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 GALNT1Q10472 559 aaPredicted RBP11.28□□□□□ -0.6
CPSF3-204ENST00000489403 SNTA1Q13424 505 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 KEAP1Q14145 624 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 LTB4RQ15722 352 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 C10orf62Q5T681 223 aaPredicted RBP11.28□□□□□ -0.6
CPSF3-204ENST00000489403 FAM180BQ6P0A1 224 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 PLXDC2Q6UX71 529 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 NUP54Q7Z3B4 507 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 ADGRE4PQ86SQ3 457 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 LUZP2Q86TE4 346 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 WFDC11Q8NEX6 87 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 ADCY4Q8NFM4 1077 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 OR52R1Q8NGF1 315 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 TRPC4APQ8TEL6 797 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 SLC44A1Q8WWI5 657 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 ISL2Q96A47 359 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 CTHRC1Q96CG8 243 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 RBM24Q9BX46 236 aaKnown RBP11.28□□□□□ -0.6
CPSF3-204ENST00000489403 OR2B2Q9GZK3 357 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 ELOVL6Q9H5J4 265 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 SERHLQ9NQF3 203 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 ZDHHC18Q9NUE0 388 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 KLRF1Q9NZS2 232 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 SLC12A4Q9UP95 1085 aa11.28□□□□□ -0.6
CPSF3-204ENST00000489403 EXO1Q9UQ84 846 aaKnown RBP11.28□□□□□ -0.6
CPSF3-204ENST00000489403 A0A1W2PPR1 153 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 PRAMEF25A6NGN4 478 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 H0Y3Z8 333 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 ACOX3O15254 700 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 GUCY1B2O75343 617 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 ERN1O75460 977 aaKnown RBP11.27□□□□□ -0.61
CPSF3-204ENST00000489403 RCBTB2O95199 551 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 PDYNP01213 254 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 HRGP04196 525 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 RPS17P08708 135 aaKnown RBP11.27□□□□□ -0.61
CPSF3-204ENST00000489403 RBP1P09455 135 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 FOSL1P15407 271 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 PCSK2P16519 638 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 PHBP35232 272 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 DEKP35659 375 aaKnown RBP11.27□□□□□ -0.61
CPSF3-204ENST00000489403 EMDP50402 254 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 GFRA1P56159 465 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 SRYQ05066 204 aa11.27□□□□□ -0.61
CPSF3-204ENST00000489403 POU4F3Q15319 338 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms