RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 CCDC115Q96NT0 180 aa14.78□□□□□ -0.04
HDAC7-224ENST00000488927 MS4A4EQ96PG1 132 aa14.78□□□□□ -0.04
HDAC7-224ENST00000488927 OR52E6Q96RD3 313 aa14.78□□□□□ -0.04
HDAC7-224ENST00000488927 RASL10BQ96S79 203 aa14.78□□□□□ -0.04
HDAC7-224ENST00000488927 RMND5AQ9H871 391 aa14.78□□□□□ -0.04
HDAC7-224ENST00000488927 TRIM45Q9H8W5 580 aaPredicted RBP14.78□□□□□ -0.04
HDAC7-224ENST00000488927 SNX8Q9Y5X2 465 aa14.78□□□□□ -0.04
HDAC7-224ENST00000488927 TRAV17A0A0B4J275 112 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 FRG2CA6NGY1 282 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 A8MVJ9 347 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 MAN1A2O60476 641 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 SCN2BO60939 215 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 ERN1O75460 977 aaKnown RBP14.77□□□□□ -0.05
HDAC7-224ENST00000488927 SOX30O94993 753 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 EFNA1P20827 205 aaPredicted RBP14.77□□□□□ -0.05
HDAC7-224ENST00000488927 CCT3P49368 545 aaKnown RBP14.77□□□□□ -0.05
HDAC7-224ENST00000488927 TMED10P49755 219 aaKnown RBP14.77□□□□□ -0.05
HDAC7-224ENST00000488927 TNFSF10P50591 281 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 SEC24CP53992 1094 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 HBA1P69905 142 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 OC90Q02509 493 aaPredicted RBP14.77□□□□□ -0.05
HDAC7-224ENST00000488927 ZNF155Q12901 538 aaPredicted RBP14.77□□□□□ -0.05
HDAC7-224ENST00000488927 DUSP8Q13202 625 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 TUBA3CQ13748 450 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 RCAN2Q14206 197 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 SPDYE7PQ495Y7 208 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 VPS26BQ4G0F5 336 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 TUBA3EQ6PEY2 450 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 Q6ZS92 163 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 SPATA21Q7Z572 469 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 CPSF7Q8N684 471 aaKnown RBP14.77□□□□□ -0.05
HDAC7-224ENST00000488927 TRIML2Q8N7C3 387 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 NUP43Q8NFH3 380 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 OR4A15Q8NGL6 344 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 PNPLA2Q96AD5 504 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 FAM120BQ96EK7 910 aaKnown RBP14.77□□□□□ -0.05
HDAC7-224ENST00000488927 MAGED4Q96JG8 741 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 VSTM2LQ96N03 204 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 BTBD9Q96Q07 612 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 ITPAQ9BY32 194 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.77□□□□□ -0.05
HDAC7-224ENST00000488927 LIN28AQ9H9Z2 209 aaKnown RBP14.77□□□□□ -0.05
HDAC7-224ENST00000488927 FOLH1BQ9HBA9 442 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 SIRT3Q9NTG7 399 aaPredicted RBP14.77□□□□□ -0.05
HDAC7-224ENST00000488927 ZCCHC3Q9NUD5 404 aaKnown RBP14.77□□□□□ -0.05
HDAC7-224ENST00000488927 HPF1Q9NWY4 346 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 PLA2G3Q9NZ20 509 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 B3GNT3Q9Y2A9 372 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 GPR55Q9Y2T6 319 aaPredicted RBP14.77□□□□□ -0.05
HDAC7-224ENST00000488927 DOCK10Q96BY6 2186 aa14.77□□□□□ -0.05
HDAC7-224ENST00000488927 CROCCQ5TZA2 2017 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 TO15178 435 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 ABCB1P08183 1280 aaPredicted RBP14.76□□□□□ -0.05
HDAC7-224ENST00000488927 KRT16P08779 473 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 NAGAP17050 411 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 CD96P40200 585 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 PRIM2P49643 509 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 NR0B1P51843 470 aaKnown RBP14.76□□□□□ -0.05
HDAC7-224ENST00000488927 DGKQP52824 942 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 PHC1P78364 1004 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 OR1C1Q15619 314 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 BLOC1S3Q6QNY0 202 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 SZRD1Q7Z422 152 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 CLECL1Q8IZS7 167 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 RBMXL3Q8N7X1 1067 aaKnown RBP14.76□□□□□ -0.05
HDAC7-224ENST00000488927 CDRT4Q8N9R6 151 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 SIMC1Q8NDZ2 872 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 OR9I1Q8NGQ6 314 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 GOT1L1Q8NHS2 421 aaPredicted RBP14.76□□□□□ -0.05
HDAC7-224ENST00000488927 C10orf82Q8WW14 230 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 TMEM125Q96AQ2 219 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 SGCZQ96LD1 299 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 PANX1Q96RD7 426 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 ZNF385DQ9H6B1 395 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 CXorf36Q9H7Y0 433 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 ANKRA2Q9H9E1 313 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 CCDC167Q9P0B6 97 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 LRFN1Q9P244 771 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 ANAPC2Q9UJX6 822 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 ERVK-11Q9UQG0 969 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 PCDHGB6Q9Y5F9 930 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 PIEZO2Q9H5I5 2752 aa14.76□□□□□ -0.05
HDAC7-224ENST00000488927 CCDC154A6NI56 674 aa14.75□□□□□ -0.05
HDAC7-224ENST00000488927 EIF4E1BA6NMX2 242 aaKnown RBP14.75□□□□□ -0.05
HDAC7-224ENST00000488927 C9JVG2 144 aa14.75□□□□□ -0.05
HDAC7-224ENST00000488927 CPSF4O95639 269 aaKnown RBP14.75□□□□□ -0.05
HDAC7-224ENST00000488927 CD46P15529 392 aa14.75□□□□□ -0.05
HDAC7-224ENST00000488927 DRD4P21917 467 aa14.75□□□□□ -0.05
HDAC7-224ENST00000488927 UQCRC2P22695 453 aa14.75□□□□□ -0.05
HDAC7-224ENST00000488927 ADSLP30566 484 aaPredicted RBP14.75□□□□□ -0.05
HDAC7-224ENST00000488927 SOAT1P35610 550 aa14.75□□□□□ -0.05
HDAC7-224ENST00000488927 SOX3P41225 446 aa14.75□□□□□ -0.05
HDAC7-224ENST00000488927 ZFP36L2P47974 494 aaKnown RBP14.75□□□□□ -0.05
HDAC7-224ENST00000488927 PRKAG1P54619 331 aa14.75□□□□□ -0.05
HDAC7-224ENST00000488927 ZNF169Q14929 603 aaPredicted RBP14.75□□□□□ -0.05
HDAC7-224ENST00000488927 MAPKAPK3Q16644 382 aa14.75□□□□□ -0.05
HDAC7-224ENST00000488927 TIGD2Q4W5G0 525 aa14.75□□□□□ -0.05
HDAC7-224ENST00000488927 AGKQ53H12 422 aa14.75□□□□□ -0.05
HDAC7-224ENST00000488927 C16orf47Q6ZP98 133 aaPredicted RBP14.75□□□□□ -0.05
HDAC7-224ENST00000488927 ANKRD46Q86W74 232 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms