RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 MKRN2OSH3BPM6 223 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 HRKO00198 91 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 ANGPT2O15123 496 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 IGKV3-11P04433 115 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 CELA2AP08217 269 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 IFI6P09912 130 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 ITGAMP11215 1152 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 S1PR1P21453 382 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 SOAT1P35610 550 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 CCT3P49368 545 aaKnown RBP9.56□□□□□ -0.88
SKA1-204ENST00000488454 CDK9P50750 372 aaKnown RBP9.56□□□□□ -0.88
SKA1-204ENST00000488454 SLC37A1P57057 533 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 SOX8P57073 446 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 HBA1P69905 142 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 RNF4P78317 190 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 PHC1P78364 1004 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 Q0VFX4 171 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 KLF10Q13118 480 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 STX5Q13190 355 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 TP53BP2Q13625 1128 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 CYLC2Q14093 348 aaPredicted RBP9.56□□□□□ -0.88
SKA1-204ENST00000488454 RCAN2Q14206 197 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 MYBPC3Q14896 1274 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 EXOSC7Q15024 291 aaKnown RBP9.56□□□□□ -0.88
SKA1-204ENST00000488454 ZNHIT3Q15649 155 aaPredicted RBP9.56□□□□□ -0.88
SKA1-204ENST00000488454 MMEL1Q495T6 779 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 CRB2Q5IJ48 1285 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 C6orf10Q5SRN2 563 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 ABHD17BQ5VST6 288 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 ZNF621Q6ZSS3 439 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 RPS19BP1Q86WX3 136 aaKnown RBP9.56□□□□□ -0.88
SKA1-204ENST00000488454 CLECL1Q8IZS7 167 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 KIF2BQ8N4N8 673 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 SIRT6Q8N6T7 355 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 ZNF321PQ8N8H1 164 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 APCDD1LQ8NCL9 501 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 NUP43Q8NFH3 380 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 OR7G2Q8NG99 324 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 BRIX1Q8TDN6 353 aaKnown RBP9.56□□□□□ -0.88
SKA1-204ENST00000488454 EXTL1Q92935 676 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 ZNF354BQ96LW1 612 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 CCDC115Q96NT0 180 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 GAL3ST4Q96RP7 486 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 SLC25A23Q9BV35 468 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 CDCP1Q9H5V8 836 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 PRORYQ9H606 182 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 RUBCNLQ9H714 662 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 ZCCHC3Q9NUD5 404 aaKnown RBP9.56□□□□□ -0.88
SKA1-204ENST00000488454 GPR83Q9NYM4 423 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 STMN3Q9NZ72 180 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 ARMCX1Q9P291 453 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 ABI3Q9P2A4 366 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 ZNF639Q9UID6 485 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 LEF1Q9UJU2 399 aaPredicted RBP9.56□□□□□ -0.88
SKA1-204ENST00000488454 VPS4AQ9UN37 437 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 C19orf53Q9UNZ5 99 aaPredicted RBP9.56□□□□□ -0.88
SKA1-204ENST00000488454 FRYQ5TBA9 3013 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 SCN2AQ99250 2005 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 LOC100653049A0A140TA62 436 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 UPK1AO00322 258 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 SCN2BO60939 215 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 DNAJB5O75953 348 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 KRT34O76011 436 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 CBX7O95931 251 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 UQCRC2P22695 453 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 CHI3L1P36222 383 aaPredicted RBP9.55□□□□□ -0.88
SKA1-204ENST00000488454 TRPC1P48995 793 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 PRIM2P49643 509 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 DCAF7P61962 342 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 RHDQ02161 417 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 RAPSNQ13702 412 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 MEP1AQ16819 746 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 COL28A1Q2UY09 1125 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 ISLR2Q6UXK2 745 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 TMEM64Q6YI46 380 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 GK5Q6ZS86 529 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 TAGAPQ8N103 731 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 OR2L13Q8N349 312 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 ZNF615Q8N8J6 731 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 FDCSPQ8NFU4 85 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 OR56A1Q8NGH5 318 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 DNAJB8Q8NHS0 232 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 C16orf52Q8NHV5 167 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 PSMA8Q8TAA3 256 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 NUBPLQ8TB37 319 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 THAP3Q8WTV1 239 aaPredicted RBP9.55□□□□□ -0.88
SKA1-204ENST00000488454 TM9SF4Q92544 642 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 CMTM5Q96DZ9 223 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 LMF1Q96S06 567 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 INPP5KQ9BT40 448 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 EPS8L2Q9H6S3 715 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 MYOTQ9UBF9 498 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 FAF1Q9UNN5 650 aaPredicted RBP9.55□□□□□ -0.88
SKA1-204ENST00000488454 HEMK1Q9Y5R4 338 aaPredicted RBP9.55□□□□□ -0.88
SKA1-204ENST00000488454 CCDC88CQ9P219 2028 aa9.55□□□□□ -0.88
SKA1-204ENST00000488454 IGF2RP11717 2491 aa9.54□□□□□ -0.88
SKA1-204ENST00000488454 NUP210LQ5VU65 1888 aa9.54□□□□□ -0.88
SKA1-204ENST00000488454 RNF103-CHMP3A0A140T963 221 aa9.54□□□□□ -0.88
SKA1-204ENST00000488454 TTC36A6NLP5 189 aa9.54□□□□□ -0.88
SKA1-204ENST00000488454 BBIP1A8MTZ0 92 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms