RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 LASP1Q14847 261 aaKnown RBP13.28□□□□□ -0.28
CUX1-209ENST00000487284 RSPO4Q2I0M5 234 aaPredicted RBP13.28□□□□□ -0.28
CUX1-209ENST00000487284 IFI44LQ53G44 452 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 ZNF628Q5EBL2 1059 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 NHSL2Q5HYW2 709 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 C6orf52Q5T4I8 152 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 TTLL10Q6ZVT0 673 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 RAB11FIP2Q7L804 512 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 ZDHHC13Q8IUH4 622 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 CHERPQ8IWX8 916 aaKnown RBP13.28□□□□□ -0.28
CUX1-209ENST00000487284 OR4N5Q8IXE1 308 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 OR2L13Q8N349 312 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 METTL27Q8N6F8 245 aaPredicted RBP13.28□□□□□ -0.28
CUX1-209ENST00000487284 OR7G2Q8NG99 324 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 OR5D16Q8NGK9 328 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 OR5K1Q8NHB7 308 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 KAT2AQ92830 837 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 GATA6Q92908 595 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 PMEPA1Q969W9 287 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 GIMAP5Q96F15 307 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 LIN37Q96GY3 246 aaPredicted RBP13.28□□□□□ -0.28
CUX1-209ENST00000487284 MS4A4EQ96PG1 132 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 THSD1Q9NS62 852 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 CUTCQ9NTM9 273 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 VNN3Q9NY84 501 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 AKAP7Q9P0M2 348 aaPredicted RBP13.28□□□□□ -0.28
CUX1-209ENST00000487284 PTGFRNQ9P2B2 879 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 DHCR7Q9UBM7 475 aaKnown RBP13.28□□□□□ -0.28
CUX1-209ENST00000487284 TRPC4Q9UBN4 977 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 LOXL2Q9Y4K0 774 aa13.28□□□□□ -0.28
CUX1-209ENST00000487284 PMS2P1A4D2B8 440 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 TMEM247A6NEH6 219 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 G3V2T6 193 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 hCG_2039718K7EN88 272 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 POLR1CO15160 346 aaPredicted RBP13.27□□□□□ -0.29
CUX1-209ENST00000487284 LDB3O75112 727 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 FGF5P12034 268 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 PPP2R1BP30154 601 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 SOX18P35713 384 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 DCTP40126 519 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 IST1P53990 364 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 PRKAG1P54619 331 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 ARSFP54793 590 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 MC2RQ01718 297 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 FUT5Q11128 374 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 DAG1Q14118 895 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 PDK3Q15120 406 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 FAM214AQ32MH5 1076 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 RPS26P11Q5JNZ5 115 aaPredicted RBP13.27□□□□□ -0.29
CUX1-209ENST00000487284 FHL5Q5TD97 284 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 PRAMEF8Q5VWM4 474 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 PRAMEF7Q5VXH5 474 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 PWWP2BQ6NUJ5 590 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 FAM111BQ6SJ93 734 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 TSEN54Q7Z6J9 526 aaKnown RBP13.27□□□□□ -0.29
CUX1-209ENST00000487284 STK32CQ86UX6 486 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 PPP1R3BQ86XI6 285 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 ARMC8Q8IUR7 673 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 ZNF675Q8TD23 568 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 ANKRD9Q96BM1 317 aaPredicted RBP13.27□□□□□ -0.29
CUX1-209ENST00000487284 SDCCAG3Q96C92 435 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 NDC1Q9BTX1 674 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 ACTRT3Q9BYD9 372 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 BCL2L10Q9HD36 194 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 DDX18Q9NVP1 670 aaKnown RBP13.27□□□□□ -0.29
CUX1-209ENST00000487284 USE1Q9NZ43 259 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 HCN3Q9P1Z3 774 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 NDOR1Q9UHB4 597 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 BAG5Q9UL15 447 aa13.27□□□□□ -0.29
CUX1-209ENST00000487284 PTPRBP23467 1997 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 A0A087WV62 115 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 A0A1W2PNU3 283 aaPredicted RBP13.26□□□□□ -0.29
CUX1-209ENST00000487284 B4E171 279 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 H0YIG0 161 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 SLC28A2O43868 658 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 SCRG1O75711 98 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 MFN2O95140 757 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 ALPLP05186 524 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 CD247P20963 164 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 ETV5P41161 510 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 TSPAN7P41732 249 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 ALDH3A2P51648 485 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 MRPS35P82673 323 aaKnown RBP13.26□□□□□ -0.29
CUX1-209ENST00000487284 PPP2R2BQ00005 443 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 ID2Q02363 134 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 IL11RAQ14626 422 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 SYPL1Q16563 259 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 MFSD12Q6NUT3 480 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 SHQ1Q6PI26 577 aaKnown RBP13.26□□□□□ -0.29
CUX1-209ENST00000487284 TMEM179BQ7Z7N9 219 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 SLC44A2Q8IWA5 706 aaPredicted RBP13.26□□□□□ -0.29
CUX1-209ENST00000487284 BBS10Q8TAM1 723 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 SPPL2AQ8TCT8 520 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 MAGEE2Q8TD90 523 aaPredicted RBP13.26□□□□□ -0.29
CUX1-209ENST00000487284 XAGE5Q8WWM1 108 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 GEMIN6Q8WXD5 167 aaKnown RBP13.26□□□□□ -0.29
CUX1-209ENST00000487284 TFAP2CQ92754 450 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 COL26A1Q96A83 441 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 C16orf58Q96GQ5 468 aa13.26□□□□□ -0.29
CUX1-209ENST00000487284 OR7D2Q96RA2 312 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms