RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 HOMER3Q9NSC5 361 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 VPS54Q9P1Q0 977 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 ERVK-18Q9QC07 812 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 ASIC3Q9UHC3 531 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 NPC1L1Q9UHC9 1359 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 IGHV3-38A0A0C4DH36 116 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 TMEM89A2RUT3 159 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 KPNA7A9QM74 516 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 TFECO14948 347 aaPredicted RBP4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 ANXA9O76027 345 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 OR6B1O95007 311 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 SYNGR4O95473 234 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 FHP07954 510 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 GNSP15586 552 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 CD1DP15813 335 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 PKLRP30613 574 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 RPL9P32969 192 aaKnown RBP4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 CD86P42081 329 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 MTIF2P46199 727 aaKnown RBP4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 ZFP36L2P47974 494 aaKnown RBP4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 PEX3P56589 373 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 HILS1P60008 231 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 PMP22Q01453 160 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 FASTKD3Q14CZ7 662 aaKnown RBP4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 P2RY14Q15391 338 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 KNOP1Q1ED39 458 aaKnown RBP4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 ADAM5Q6NVV9 412 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 CDC42EP5Q6NZY7 148 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 ZCCHC12Q6PEW1 402 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 GDPGP1Q6ZNW5 385 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 Q6ZRG5 221 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 LRRTM1Q86UE6 522 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 KCNMB4Q86W47 210 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 ZFAND4Q86XD8 727 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 TBC1D10CQ8IV04 446 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 CNNM3Q8NE01 707 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 C16orf58Q96GQ5 468 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 NAF1Q96HR8 494 aaKnown RBP4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 POM121L2Q96KW2 1035 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 SAMD8Q96LT4 415 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 OPRPNQ99935 248 aaPredicted RBP4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 SYT11Q9BT88 431 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 KRTAP9-8Q9BYQ0 159 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 WDR41Q9HAD4 459 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 HPS4Q9NQG7 708 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 ZDHHC18Q9NUE0 388 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 MDFICQ9P1T7 246 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 THAP10Q9P2Z0 257 aaPredicted RBP4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 ERRFI1Q9UJM3 462 aaPredicted RBP4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 RNF215Q9Y6U7 377 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 KIF24Q5T7B8 1368 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 TONSLQ96HA7 1378 aa4.14□□□□□ -1.75
PRPF38A-203ENST00000487160 TMCO5BA8MYB1 307 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 NEDD8-MDP1E9PL57 170 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 ARHGEF9O43307 516 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 ZNF749O43361 778 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 B3GALNT1O75752 331 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 PTBP3O95758 552 aaKnown RBP4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 PROS1P07225 676 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 HIST1H2AGP0C0S8 130 aaPredicted RBP4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 PRDX6P30041 224 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 FCGR2BP31994 310 aaPredicted RBP4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 FCGR2CP31995 323 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 TKTL1P51854 596 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 CRYBA2P53672 197 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 RPS27AP62979 156 aaKnown RBP4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 SLC17A1Q14916 467 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 KARSQ15046 597 aaKnown RBP4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 UPP1Q16831 310 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 OTUD3Q5T2D3 398 aaPredicted RBP4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 GFI1BQ5VTD9 330 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 LIPJQ5W064 366 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 TRIM65Q6PJ69 517 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 CDHR3Q6ZTQ4 885 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 MCM10Q7L590 875 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 WDSUB1Q8N9V3 476 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 P3H4Q92791 437 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 HIST1H2ACQ93077 130 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 MRPL38Q96DV4 380 aaKnown RBP4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 CAPNS2Q96L46 248 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 PRICKLE1Q96MT3 831 aaPredicted RBP4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 TNFRSF13CQ96RJ3 184 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 LGMNQ99538 433 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 PARLQ9H300 379 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 NMUR1Q9HB89 426 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 SLC25A19Q9HC21 320 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 NUDT4Q9NZJ9 180 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 CNOT2Q9NZN8 540 aaKnown RBP4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 CLIP2Q9UDT6 1046 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 CLCA3PQ9Y6N3 262 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 UBE4BO95155 1302 aa4.13□□□□□ -1.75
PRPF38A-203ENST00000487160 SIPA1L3O60292 1781 aaPredicted RBP4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 RBBP6Q7Z6E9 1792 aaKnown RBP4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 KIF26BQ2KJY2 2108 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 TRAFD1O14545 582 aaPredicted RBP4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 RASGRF2O14827 1237 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 IDH3BO43837 385 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms