RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 ATG16L1Q676U5 607 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 TMEM107Q6UX40 140 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 TMEM64Q6YI46 380 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 ZNF227Q86WZ6 799 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 TRIM42Q8IWZ5 723 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 DND1Q8IYX4 353 aaKnown RBP9.43□□□□□ -0.9
NEK4-204ENST00000487068 SLC15A4Q8N697 577 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 ZNF615Q8N8J6 731 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 GOLM1Q8NBJ4 401 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 POGLUT1Q8NBL1 392 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 ZNF675Q8TD23 568 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 TLCD1Q96CP7 247 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 C11orf24Q96F05 449 aaPredicted RBP9.43□□□□□ -0.9
NEK4-204ENST00000487068 SGCZQ96LD1 299 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 JSRP1Q96MG2 331 aaPredicted RBP9.43□□□□□ -0.9
NEK4-204ENST00000487068 ZNF681Q96N22 645 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 NUF2Q9BZD4 464 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 ACBD3Q9H3P7 528 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 REEP4Q9H6H4 257 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 ZNF395Q9H8N7 513 aaPredicted RBP9.43□□□□□ -0.9
NEK4-204ENST00000487068 TRIM45Q9H8W5 580 aaPredicted RBP9.43□□□□□ -0.9
NEK4-204ENST00000487068 MARCOQ9UEW3 520 aaPredicted RBP9.43□□□□□ -0.9
NEK4-204ENST00000487068 EIF3LQ9Y262 564 aaKnown RBP9.43□□□□□ -0.9
NEK4-204ENST00000487068 DTX4Q9Y2E6 619 aa9.43□□□□□ -0.9
NEK4-204ENST00000487068 SPTBN1Q01082 2364 aaKnown RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 TRGV8A0A0C4DH27 118 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 A0A0G2JMM0 328 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 A0A1W2PPB8 328 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 A0A1W2PRS3 328 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 ASPDHA6ND91 283 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 KIR3DP1A8MWS1 328 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 NPIPB8E9PQR5 432 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 TP53I11O14683 189 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 HS6ST1O60243 411 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 ZNF354AO60765 605 aaPredicted RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 CBX6O95503 412 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 NADKO95544 446 aaPredicted RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 CBX7O95931 251 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 BCKDHAP12694 445 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 ABOP16442 354 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 MST1P26927 711 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 IL12BP29460 328 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 RPL3P39023 403 aaKnown RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 DNASE1L1P49184 302 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 TDGF1P3P51864 188 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 WDR4P57081 412 aaKnown RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 FBXW4P57775 412 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 RPP38P78345 283 aaKnown RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 KIAA0040Q15053 153 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 RPS6KA2Q15349 733 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 ZNHIT3Q15649 155 aaPredicted RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 UGT3A2Q3SY77 523 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 SWT1Q5T5J6 900 aaKnown RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 IL23RQ5VWK5 629 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 SLC22A10Q63ZE4 541 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 R3HCC1LQ7Z5L2 792 aaKnown RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 SIMC1Q8NDZ2 872 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 OR2M7Q8NG81 312 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 OR10G3Q8NGC4 313 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 SSC4DQ8WTU2 575 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 DIO2Q92813 273 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 TP53INP1Q96A56 240 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 CIDECQ96AQ7 238 aaPredicted RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 ARL8AQ96BM9 186 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 ZBED6CLQ96FA7 236 aaPredicted RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 LCORQ96JN0 433 aaPredicted RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 ATP6V1G3Q96LB4 118 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 C3orf30Q96M34 536 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 SORT1Q99523 831 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 FAM173AQ9BQD7 235 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 DOHHQ9BU89 302 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 NXF5Q9H1B4 397 aaKnown RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 EXO5Q9H790 373 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 EQTNQ9NQ60 294 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 TAS2R9Q9NYW1 312 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 NOP53Q9NZM5 478 aaKnown RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 BOKQ9UMX3 212 aaPredicted RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 WBP11Q9Y2W2 641 aaKnown RBP9.42□□□□□ -0.9
NEK4-204ENST00000487068 OR10H1Q9Y4A9 318 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 NPFFR2Q9Y5X5 522 aa9.42□□□□□ -0.9
NEK4-204ENST00000487068 MYO9AB2RTY4 2548 aa9.41□□□□□ -0.9
NEK4-204ENST00000487068 MYO1GB0I1T2 1018 aa9.41□□□□□ -0.9
NEK4-204ENST00000487068 SCAMP2O15127 329 aaKnown RBP9.41□□□□□ -0.9
NEK4-204ENST00000487068 ERN1O75460 977 aaKnown RBP9.41□□□□□ -0.9
NEK4-204ENST00000487068 SLITRK5O94991 958 aa9.41□□□□□ -0.9
NEK4-204ENST00000487068 FBXO45P0C2W1 286 aa9.41□□□□□ -0.9
NEK4-204ENST00000487068 PRPS2P11908 318 aa9.41□□□□□ -0.9
NEK4-204ENST00000487068 H2AFXP16104 143 aaPredicted RBP9.41□□□□□ -0.9
NEK4-204ENST00000487068 EFNA1P20827 205 aaPredicted RBP9.41□□□□□ -0.9
NEK4-204ENST00000487068 ABCD3P28288 659 aa9.41□□□□□ -0.9
NEK4-204ENST00000487068 PIGAP37287 484 aa9.41□□□□□ -0.9
NEK4-204ENST00000487068 MASP1P48740 699 aa9.41□□□□□ -0.9
NEK4-204ENST00000487068 PRKAG1P54619 331 aa9.41□□□□□ -0.9
NEK4-204ENST00000487068 MANFP55145 182 aaKnown RBP9.41□□□□□ -0.9
NEK4-204ENST00000487068 PTGR1Q14914 329 aa9.41□□□□□ -0.9
NEK4-204ENST00000487068 ZNF791Q3KP31 576 aaPredicted RBP9.41□□□□□ -0.9
NEK4-204ENST00000487068 TTMPQ5BVD1 217 aa9.41□□□□□ -0.9
NEK4-204ENST00000487068 C6orf136Q5SQH8 315 aa9.41□□□□□ -0.9
NEK4-204ENST00000487068 C1QL3Q5VWW1 255 aa9.41□□□□□ -0.9
NEK4-204ENST00000487068 ZNF551Q7Z340 670 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms