RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CD9P21926 228 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 PSMB4P28070 264 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 PEBP1P30086 187 aaKnown RBP3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 MAGEA1P43355 309 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 RAB28P51157 221 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 RIPPLY3P57055 190 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 HILS1P60008 231 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 OTUD4Q01804 1114 aaKnown RBP3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 CDC16Q13042 620 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 ART3Q13508 389 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 OLIG2Q13516 323 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 PARP6Q2NL67 630 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 DEFB110Q30KQ9 67 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 TUBB8Q3ZCM7 444 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 ALG10Q5BKT4 473 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 DNAJC21Q5F1R6 531 aaKnown RBP3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 ALG10BQ5I7T1 473 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 TCTE1Q5JU00 501 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 KCTD11Q693B1 232 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 C11orf63Q6NUN7 778 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 PACS1Q6VY07 963 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 ZNF771Q7L3S4 317 aaPredicted RBP3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 TRIM73Q86UV7 250 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 CCDC50Q8IVM0 306 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 CDKL3Q8IVW4 592 aaPredicted RBP3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 PIANPQ8IYJ0 282 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 TXLNBQ8N3L3 684 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 BCORP1Q8N888 145 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 OR11G2Q8NGC1 345 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 ACTL9Q8TC94 416 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 STYXQ8WUJ0 223 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 TMEM255BQ8WV15 326 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 TMED6Q8WW62 240 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 ELMO1Q92556 727 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 HAS2Q92819 552 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 ZUFSPQ96AP4 578 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 SLC22A18Q96BI1 424 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 HAUS1Q96CS2 278 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 FAR2Q96K12 515 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 DNAJC1Q96KC8 554 aaKnown RBP3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 SPATA13Q96N96 652 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 ZNF285Q96NJ3 590 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 ALS2CR12Q96Q35 445 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 SLX1AQ9BQ83 275 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 TBL1YQ9BQ87 522 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 HEMGNQ9BXL5 484 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 KLHL31Q9H511 634 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 C10orf88Q9H8K7 445 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 CUTCQ9NTM9 273 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 OLAHQ9NV23 265 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 IRAK4Q9NWZ3 460 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 SMARCAL1Q9NZC9 954 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 COPG2Q9UBF2 871 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 CDC23Q9UJX2 597 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 NXT1Q9UKK6 140 aaKnown RBP3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 TDRKHQ9Y2W6 561 aaKnown RBP3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 CSAG2Q9Y5P2 127 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 KLF2Q9Y5W3 355 aaPredicted RBP3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 PRSS21Q9Y6M0 314 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 NOTCH3Q9UM47 2321 aa3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 INTS1Q8N201 2190 aaKnown RBP3.73□□□□□ -1.81
SNRNP40-205ENST00000486941 CSMD1Q96PZ7 3565 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 TACC2O95359 2948 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 SCN3AQ9NY46 2000 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 IGLV3-12A0A075B6K2 115 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 TRAV17A0A0B4J275 112 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 A0A1W2PQ72 361 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 SYCE3A1L190 88 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 DYTNA2CJ06 578 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 HYKKA2RU49 373 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 KCNN4O15554 427 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 PSMD3O43242 534 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 ALOX12BO75342 701 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 GPC4O75487 556 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 SOX30O94993 753 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 HPP00738 406 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 RPN2P04844 631 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 OR56A5P0C7T3 313 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 PRSS56P0CW18 603 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 MSNP26038 577 aaKnown RBP3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 CTNNA2P26232 953 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 PKLRP30613 574 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 FOXN2P32314 431 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 CTNNA1P35221 906 aaKnown RBP3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 PTGER4P35408 488 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 PPARGP37231 505 aaPredicted RBP3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 CETN2P41208 172 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 OR1D4P47884 311 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 MARCKSL1P49006 195 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 TDGF1P3P51864 188 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 EIF3EP60228 445 aaKnown RBP3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 SEC61A1P61619 476 aaKnown RBP3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 MFAP5Q13361 173 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 GRB7Q14451 532 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 SPARCL1Q14515 664 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 BRD3Q15059 726 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 INAQ16352 499 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 RBBP7Q16576 425 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 SYTL3Q4VX76 610 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms