RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SLC26A5P58743 744 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 ATP1A4Q13733 1029 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 NFYCQ13952 458 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 CAPRIN1Q14444 709 aaKnown RBP11.88□□□□□ -0.51
HDAC6-229ENST00000486665 C6orf120Q7Z4R8 191 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 DHDDSQ86SQ9 333 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 RAB43Q86YS6 212 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 OR2L13Q8N349 312 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 MORN4Q8NDC4 146 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 NUP43Q8NFH3 380 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 OR52R1Q8NGF1 315 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 OR1N1Q8NGS0 311 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 ZFP90Q8TF47 636 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 NCLNQ969V3 563 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 NACC2Q96BF6 587 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 AURKBQ96GD4 344 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-229ENST00000486665 C16orf58Q96GQ5 468 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 FBXL20Q96IG2 436 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 ARHGAP9Q9BRR9 750 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 SLC39A3Q9BRY0 314 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 OR10A5Q9H207 317 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 ZNF160Q9HCG1 818 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 PTGFRNQ9P2B2 879 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 BCAP29Q9UHQ4 241 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 ZNF223Q9UK11 482 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-229ENST00000486665 VPS4AQ9UN37 437 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 PPIEQ9UNP9 301 aaKnown RBP11.88□□□□□ -0.51
HDAC6-229ENST00000486665 C19orf53Q9UNZ5 99 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-229ENST00000486665 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 NSG1A0A0A6YYJ2 146 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 RNF103-CHMP3A0A140T963 221 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 B2RBV5 119 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 FXYD1O00168 92 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 SLITRK5O94991 958 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 UNC5CO95185 931 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 PSMG1O95456 288 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 ANP32DO95626 131 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 HPP00738 406 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 IFI6P09912 130 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 PRKAR1AP10644 381 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 EMDP50402 254 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 NUDT2P50583 147 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 CASP9P55211 416 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 SLC37A1P57057 533 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 SRSF1Q07955 248 aaKnown RBP eCLIP11.87□□□□□ -0.51
HDAC6-229ENST00000486665 Q0VFX4 171 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 BNIP1Q12981 228 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 SELPLGQ14242 412 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 TRMT5Q32P41 509 aaKnown RBP11.87□□□□□ -0.51
HDAC6-229ENST00000486665 SPDYE7PQ495Y7 208 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 RUNDC3AQ59EK9 446 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 COLEC12Q5KU26 742 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 TMEM64Q6YI46 380 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 RINLQ6ZS11 566 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 KIF2BQ8N4N8 673 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 PCYOX1LQ8NBM8 494 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 APCDD1LQ8NCL9 501 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 B3GNT7Q8NFL0 401 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 OR7G1Q8NGA0 311 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 SFXN5Q8TD22 340 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 LRRC58Q96CX6 371 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 GIMAP5Q96F15 307 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 CGREF1Q99674 301 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 SLC35A5Q9BS91 424 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 TUBB6Q9BUF5 446 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 TRIM8Q9BZR9 551 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 IKZF5Q9H5V7 419 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 C3orf14Q9HBI5 128 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 NEUROD4Q9HD90 331 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 ZCCHC3Q9NUD5 404 aaKnown RBP11.87□□□□□ -0.51
HDAC6-229ENST00000486665 DDX18Q9NVP1 670 aaKnown RBP11.87□□□□□ -0.51
HDAC6-229ENST00000486665 GPATCH2Q9NW75 528 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 LRRK2Q5S007 2527 aa11.87□□□□□ -0.51
HDAC6-229ENST00000486665 NBASA2RRP1 2371 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 ZNF891A8MT65 544 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-229ENST00000486665 EBAG9O00559 213 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 PEX12O00623 359 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 DYRK3O43781 588 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 PRKNO60260 465 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-229ENST00000486665 CALB2P22676 271 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 SLC25A3Q00325 362 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 ART3Q13508 389 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 C6orf163Q5TEZ5 329 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 SAXO2Q658L1 398 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 PLAG1Q6DJT9 500 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 C8orf82Q6P1X6 216 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-229ENST00000486665 HACD2Q6Y1H2 254 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 WDR53Q7Z5U6 358 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-229ENST00000486665 PTRH1Q86Y79 214 aaKnown RBP11.86□□□□□ -0.51
HDAC6-229ENST00000486665 DNAJB8Q8NHS0 232 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 C16orf52Q8NHV5 167 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 M1APQ8TC57 530 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 PNPT1Q8TCS8 783 aaKnown RBP11.86□□□□□ -0.51
HDAC6-229ENST00000486665 ELP5Q8TE02 316 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 NEURL3Q96EH8 262 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 ANKRD27Q96NW4 1050 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 CPPED1Q9BRF8 314 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-229ENST00000486665 GPATCH1Q9BRR8 931 aaKnown RBP11.86□□□□□ -0.51
HDAC6-229ENST00000486665 YIPF4Q9BSR8 244 aa11.86□□□□□ -0.51
HDAC6-229ENST00000486665 SERHL2Q9H4I8 314 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms