RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 COQ3Q9NZJ6 369 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 SLC17A7Q9P2U7 560 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 CNOT11Q9UKZ1 510 aaKnown RBP11.85□□□□□ -0.51
CHMP3-208ENST00000486404 KLF2Q9Y5W3 355 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-208ENST00000486404 ARHGAP21Q5T5U3 1957 aa11.85□□□□□ -0.51
CHMP3-208ENST00000486404 TRGV5A0A0B4J1U4 118 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 OR14I1A6ND48 311 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 FRG2CA6NGY1 282 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 RGS16O15492 202 aaPredicted RBP11.84□□□□□ -0.51
CHMP3-208ENST00000486404 NPHS1O60500 1241 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 COQ9O75208 318 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 PPM1BO75688 479 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 CBX7O95931 251 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 CELA3AP09093 270 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 AGAP20933 346 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 ALDH3A1P30838 453 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 MPIP34949 423 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 KRT20P35900 424 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 NCBP2P52298 156 aaKnown RBP eCLIP11.84□□□□□ -0.51
CHMP3-208ENST00000486404 RPL38P63173 70 aaKnown RBP11.84□□□□□ -0.51
CHMP3-208ENST00000486404 MGAT2Q10469 447 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 FOXO1Q12778 655 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 SLC10A1Q14973 349 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 HYAL4Q2M3T9 481 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 TRMT12Q53H54 448 aaKnown RBP11.84□□□□□ -0.51
CHMP3-208ENST00000486404 KANK2Q63ZY3 851 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 TMEM211Q6ICI0 200 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 NOXRED1Q6NXP6 359 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 NCCRP1Q6ZVX7 275 aaPredicted RBP11.84□□□□□ -0.51
CHMP3-208ENST00000486404 TRILQ7L0X0 811 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 PACS2Q86VP3 889 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 HOMEZQ8IX15 550 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 SLC34A3Q8N130 599 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 MREGQ8N565 214 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 PPP1R14CQ8TAE6 165 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 SPPL2AQ8TCT8 520 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 TCP10LQ8TDR4 215 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 KAT2AQ92830 837 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 SARAFQ96BY9 339 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 OMA1Q96E52 524 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 SECISBP2Q96T21 854 aaKnown RBP11.84□□□□□ -0.51
CHMP3-208ENST00000486404 MECRQ9BV79 373 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 CENPHQ9H3R5 247 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 RUBCNLQ9H714 662 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 LRTM1Q9HBL6 345 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 TNFRSF12AQ9NP84 129 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 C1orf109Q9NX04 203 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 KLRF1Q9NZS2 232 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 ACAD8Q9UKU7 415 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 PTGDR2Q9Y5Y4 395 aa11.84□□□□□ -0.51
CHMP3-208ENST00000486404 LRRC3CA6NJW4 275 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 AQP7O14520 342 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 HCN1O60741 890 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 SLITRK5O94991 958 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 SNX4O95219 450 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 CLDN14O95500 239 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 IGHG3P01860 377 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 JUNP05412 331 aaKnown RBP11.83□□□□□ -0.52
CHMP3-208ENST00000486404 S1PR1P21453 382 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 HTR1EP28566 365 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 IL12BP29460 328 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 PSPHP78330 225 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 DUSP8Q13202 625 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 TOMM20Q15388 145 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 GALNTL6Q49A17 601 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 SH2D4BQ5SQS7 431 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 BICRALQ6AI39 1079 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 ZNF585AQ6P3V2 769 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 ZCCHC23Q6ZST2 131 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 OR5M9Q8NGP3 310 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 AGR3Q8TD06 166 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 CA5BP1Q8WTZ4 195 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 TWIST2Q8WVJ9 160 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 SDCCAG3Q96C92 435 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 CTHRC1Q96CG8 243 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 C11orf24Q96F05 449 aaPredicted RBP11.83□□□□□ -0.52
CHMP3-208ENST00000486404 METTL2AQ96IZ6 378 aaKnown RBP11.83□□□□□ -0.52
CHMP3-208ENST00000486404 DMRTA2Q96SC8 542 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 OSBPL11Q9BXB4 747 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 PARD6BQ9BYG5 372 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 STMN4Q9H169 189 aaPredicted RBP11.83□□□□□ -0.52
CHMP3-208ENST00000486404 CHST11Q9NPF2 352 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 PNPLA3Q9NST1 481 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 QPCTLQ9NXS2 382 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 ZNF639Q9UID6 485 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 WBP11Q9Y2W2 641 aaKnown RBP11.83□□□□□ -0.52
CHMP3-208ENST00000486404 OR10H1Q9Y4A9 318 aa11.83□□□□□ -0.52
CHMP3-208ENST00000486404 C15orf38-AP3S2A0A0A6YYH1 394 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 ANKRD33BA6NCL7 494 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 TMEM233B4DJY2 109 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 HNRNPRO43390 633 aaKnown RBP11.82□□□□□ -0.52
CHMP3-208ENST00000486404 SUSD5O60279 629 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 ERN1O75460 977 aaKnown RBP11.82□□□□□ -0.52
CHMP3-208ENST00000486404 TRAPPC6AO75865 159 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 CHRNGP07510 517 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 RFPL3SP0C7P2 107 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 LINC00032P0C843 101 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 COX6B1P14854 86 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 NAGAP17050 411 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms