RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 BPIFA3Q9BQP9 254 aa8.6□□□□□ -1.03
PTPN7-213ENST00000486116 CBLN4Q9NTU7 201 aa8.6□□□□□ -1.03
PTPN7-213ENST00000486116 DNAJC11Q9NVH1 559 aa8.6□□□□□ -1.03
PTPN7-213ENST00000486116 KLRF1Q9NZS2 232 aa8.6□□□□□ -1.03
PTPN7-213ENST00000486116 TMEFF2Q9UIK5 374 aaPredicted RBP8.6□□□□□ -1.03
PTPN7-213ENST00000486116 CLEC4AQ9UMR7 237 aa8.6□□□□□ -1.03
PTPN7-213ENST00000486116 SOX13Q9UN79 622 aa8.6□□□□□ -1.03
PTPN7-213ENST00000486116 TFR2Q9UP52 801 aa8.6□□□□□ -1.03
PTPN7-213ENST00000486116 SLC22A14Q9Y267 594 aa8.6□□□□□ -1.03
PTPN7-213ENST00000486116 EMC9Q9Y3B6 208 aa8.6□□□□□ -1.03
PTPN7-213ENST00000486116 GOLGA6L9A6NEM1 432 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 RTCAO00442 366 aaKnown RBP8.59□□□□□ -1.03
PTPN7-213ENST00000486116 SEC14L5O43304 696 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 SS18L1O75177 396 aaPredicted RBP8.59□□□□□ -1.03
PTPN7-213ENST00000486116 GCM2O75603 506 aaPredicted RBP8.59□□□□□ -1.03
PTPN7-213ENST00000486116 ALDOAP04075 364 aaKnown RBP8.59□□□□□ -1.03
PTPN7-213ENST00000486116 C1GALT1C1LP0DN25 315 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 IL11P20809 199 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 ATP5A1P25705 553 aaKnown RBP8.59□□□□□ -1.03
PTPN7-213ENST00000486116 TTKP33981 857 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 SLC1A2P43004 574 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 SLC6A8P48029 635 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 NPY2RP49146 381 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 NEK2P51955 445 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 EFNA4P52798 201 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 CLDN20P56880 219 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 NRG3P56975 720 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 LGALS3BPQ08380 585 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 SNTA1Q13424 505 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 HLA-DQA1Q5Y7H0 255 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 PAQR3Q6TCH7 311 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 DEF8Q6ZN54 512 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 SLCO4C1Q6ZQN7 724 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 BEND4Q6ZU67 534 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 ACOT4Q8N9L9 421 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 C7orf57Q8NEG2 295 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 STEAP2Q8NFT2 490 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 ATG4AQ8WYN0 398 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 RIT1Q92963 219 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 LINGO1Q96FE5 620 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 NXF5Q9H1B4 397 aaKnown RBP8.59□□□□□ -1.03
PTPN7-213ENST00000486116 RPF2Q9H7B2 306 aaKnown RBP8.59□□□□□ -1.03
PTPN7-213ENST00000486116 METTL17Q9H7H0 456 aaPredicted RBP8.59□□□□□ -1.03
PTPN7-213ENST00000486116 NHEJ1Q9H9Q4 299 aaPredicted RBP8.59□□□□□ -1.03
PTPN7-213ENST00000486116 NGBQ9NPG2 151 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 BFARQ9NZS9 450 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 TRMT6Q9UJA5 497 aaKnown RBP8.59□□□□□ -1.03
PTPN7-213ENST00000486116 DKKL1Q9UK85 242 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 MRPS18CQ9Y3D5 142 aaKnown RBP8.59□□□□□ -1.03
PTPN7-213ENST00000486116 BIRC6Q9NR09 4857 aa8.59□□□□□ -1.03
PTPN7-213ENST00000486116 UQCRHLA0A096LP55 91 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 PRAMEF25A6NGN4 478 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 WASHC1A8K0Z3 465 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 C17orf51A8MQB3 221 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 SMTNL1A8MU46 457 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 E7EQL1 145 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 TRIM77I1YAP6 450 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 SMAD9O15198 467 aaKnown RBP8.58□□□□□ -1.04
PTPN7-213ENST00000486116 UGT2B11O75310 529 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 IFNB1P01574 187 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 ZNF23P17027 643 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 KRT15P19012 456 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 GSTM2P28161 218 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 DEKP35659 375 aaKnown RBP8.58□□□□□ -1.04
PTPN7-213ENST00000486116 RBMXP38159 391 aaKnown RBP8.58□□□□□ -1.04
PTPN7-213ENST00000486116 KCNC1P48547 511 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 RGS4P49798 205 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 RWDD2BP57060 319 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 HILS1P60008 231 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 HMGCS1Q01581 520 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 BIKQ13323 160 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 OASLQ15646 514 aaKnown RBP8.58□□□□□ -1.04
PTPN7-213ENST00000486116 NNATQ16517 81 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 C18orf63Q68DL7 685 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 RINLQ6ZS11 566 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 NUP54Q7Z3B4 507 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 ZNF615Q8N8J6 731 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 KCNC2Q96PR1 638 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 BTBD9Q96Q07 612 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 HBEGFQ99075 208 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 NDNQ99608 321 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 PIMREGQ9BSJ6 248 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 RBM4Q9BWF3 364 aaKnown RBP8.58□□□□□ -1.04
PTPN7-213ENST00000486116 HEATR1Q9H583 2144 aaKnown RBP8.58□□□□□ -1.04
PTPN7-213ENST00000486116 NT5DC2Q9H857 520 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 FANCFQ9NPI8 374 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 EHD3Q9NZN3 535 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 IKZF3Q9UKT9 509 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 ZNF337Q9Y3M9 751 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 SNX8Q9Y5X2 465 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 MAD1L1Q9Y6D9 718 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 COMMD10Q9Y6G5 202 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 KCNE2Q9Y6J6 123 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 SPACA6W5XKT8 324 aa8.58□□□□□ -1.04
PTPN7-213ENST00000486116 EPPK1P58107 5090 aaKnown RBP8.57□□□□□ -1.04
PTPN7-213ENST00000486116 A0A1W2PS29 197 aa8.57□□□□□ -1.04
PTPN7-213ENST00000486116 ESYT3A0FGR9 886 aa8.57□□□□□ -1.04
PTPN7-213ENST00000486116 SYCE3A1L190 88 aa8.57□□□□□ -1.04
PTPN7-213ENST00000486116 ANKDD1BA6NHY2 528 aa8.57□□□□□ -1.04
PTPN7-213ENST00000486116 EFCAB8A8MWE9 144 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms