RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 OPN5Q6U736 354 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 RNF111Q6ZNA4 994 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 Q6ZSR9 355 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 ZCCHC23Q6ZST2 131 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 SLC29A4Q7RTT9 530 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 MTERF4Q7Z6M4 381 aaKnown RBP9.23□□□□□ -0.93
CPSF4-213ENST00000484112 OR4N5Q8IXE1 308 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 DMRTC2Q8IXT2 367 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-213ENST00000484112 FAM9CQ8IZT9 166 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 MMP21Q8N119 569 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 LRRC25Q8N386 305 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-213ENST00000484112 NATD1Q8N6N6 113 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 POGLUT1Q8NBL1 392 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 OR52N2Q8NGI0 321 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 OR10Q1Q8NGQ4 319 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 ZNF675Q8TD23 568 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 TP53INP1Q96A56 240 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 KLHL29Q96CT2 875 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 MTERF3Q96E29 417 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 SGCZQ96LD1 299 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 TMUB1Q9BVT8 246 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 TP63Q9H3D4 680 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-213ENST00000484112 ACBD3Q9H3P7 528 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 TNFRSF12AQ9NP84 129 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 CCM2LQ9NUG4 571 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-213ENST00000484112 UTS2RQ9UKP6 389 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 MAPRE3Q9UPY8 281 aa9.23□□□□□ -0.93
CPSF4-213ENST00000484112 GLOD5A6NK44 160 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 HMGB1P1B2RPK0 211 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-213ENST00000484112 NPIPA2E9PIF3 369 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 NPIPA3F8WFD2 350 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 SLCO1B7G3V0H7 640 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 KLF11O14901 512 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 PRKRAO75569 313 aaKnown RBP9.22□□□□□ -0.93
CPSF4-213ENST00000484112 ITGA10O75578 1167 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 LYPLA1O75608 230 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-213ENST00000484112 IGFBP2P18065 325 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 MSX1P28360 303 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 SLC1A6P48664 564 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 RPL14P50914 215 aaKnown RBP9.22□□□□□ -0.93
CPSF4-213ENST00000484112 NR0B1P51843 470 aaKnown RBP9.22□□□□□ -0.93
CPSF4-213ENST00000484112 HK2P52789 917 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 SLC37A1P57057 533 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 NUP107P57740 925 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 DCAF7P61962 342 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 PPP2R2AP63151 447 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 ID2Q02363 134 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 BTKQ06187 659 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 TFF3Q07654 80 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 STX3Q13277 289 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 MPP2Q14168 576 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 ATP6AP1LQ52LC2 224 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 CMPK2Q5EBM0 449 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 FAM71E1Q6IPT2 247 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 SCIMPQ6UWF3 145 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 R3HCC1LQ7Z5L2 792 aaKnown RBP9.22□□□□□ -0.93
CPSF4-213ENST00000484112 DDIASQ8IXT1 998 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 TMEM156Q8N614 296 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 GOLM1Q8NBJ4 401 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 OR5M3Q8NGP4 307 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 SLC22A8Q8TCC7 542 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 PPWD1Q96BP3 646 aaKnown RBP9.22□□□□□ -0.93
CPSF4-213ENST00000484112 CTHRC1Q96CG8 243 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 CNRIP1Q96F85 164 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-213ENST00000484112 ATP6V1G3Q96LB4 118 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 ZNF681Q96N22 645 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 SH3GL2Q99962 352 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 TUBB1Q9H4B7 451 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 MIEF1Q9NQG6 463 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 SLC35C2Q9NQQ7 365 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 THAP1Q9NVV9 213 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 HEY2Q9UBP5 337 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 KCNN3Q9UGI6 736 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 ZDHHC2Q9UIJ5 367 aa9.22□□□□□ -0.93
CPSF4-213ENST00000484112 WDR91A4D1P6 747 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 TMEM200CA6NKL6 621 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 FAM166BA8MTA8 275 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 CAPN14A8MX76 684 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 MYO1GB0I1T2 1018 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 PIP5K1BO14986 540 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 ERAL1O75616 437 aaKnown RBP9.21□□□□□ -0.94
CPSF4-213ENST00000484112 OR2J2O76002 312 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 HOXD4P09016 255 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-213ENST00000484112 LINC00032P0C843 101 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 PRPS2P11908 318 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 KLK2P20151 261 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 NT5EP21589 574 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 ARRB2P32121 409 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 ALDH9A1P49189 494 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 WDR4P57081 412 aaKnown RBP9.21□□□□□ -0.94
CPSF4-213ENST00000484112 ERVK-8P63133 956 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 PLGLB1Q02325 96 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 C2orf80Q0P641 193 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 ZNF267Q14586 743 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-213ENST00000484112 PRICKLE4Q2TBC4 344 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 RFTN2Q52LD8 501 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-213ENST00000484112 PIGGQ5H8A4 983 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 ZNF585AQ6P3V2 769 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 ARHGAP11AQ6P4F7 1023 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 PAOXQ6QHF9 649 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms