RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 GIN1Q9NXP7 522 aa24.57■■□□□ 1.52
SHOX2-204ENST00000483851 TMEM150CB9EJG8 249 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 H3BSA7 217 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 SP9P0CG40 484 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 THRBP10828 461 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 MYF5P13349 255 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 CDH2P19022 906 aaPredicted RBP24.56■■□□□ 1.52
SHOX2-204ENST00000483851 CD247P20963 164 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 GCGRP47871 477 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 RFX4Q33E94 735 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 TRIM61Q5EBN2 209 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 GPR135Q8IZ08 494 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 OFCC1Q8IZS5 231 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 TMIGD2Q96BF3 282 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 MMABQ96EY8 250 aaPredicted RBP24.56■■□□□ 1.52
SHOX2-204ENST00000483851 ZNF300Q96RE9 604 aaPredicted RBP24.56■■□□□ 1.52
SHOX2-204ENST00000483851 RUBCNLQ9H714 662 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 VCX3AQ9NNX9 186 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 TMEM9Q9P0T7 183 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 HCN3Q9P1Z3 774 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 SERTAD3Q9UJW9 196 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 CDC14AQ9UNH5 594 aa24.56■■□□□ 1.52
SHOX2-204ENST00000483851 CPNE6O95741 557 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 ALBP02768 609 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 NT5EP21589 574 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 KCNJ5P48544 419 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 IST1P53990 364 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 HSD17B7P56937 341 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 MAP4K2Q12851 820 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 RPS26P11Q5JNZ5 115 aaPredicted RBP24.55■■□□□ 1.52
SHOX2-204ENST00000483851 HEPHL1Q6MZM0 1159 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 GUSBP11Q6P575 273 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 FAM111BQ6SJ93 734 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 B3GNT6Q6ZMB0 384 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 PROX1Q92786 737 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 FANCEQ9HB96 536 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 MAT2BQ9NZL9 334 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 DNAH14Q0VDD8 3507 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 SOX18P35713 384 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 KCNAB1Q14722 419 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 DUSP7Q16829 419 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 EXOSC6Q5RKV6 272 aaKnown RBP24.55■■□□□ 1.52
SHOX2-204ENST00000483851 APOBEC4Q8WW27 367 aaKnown RBP24.55■■□□□ 1.52
SHOX2-204ENST00000483851 PEX11GQ96HA9 241 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 YIPF4Q9BSR8 244 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 FSCN3Q9NQT6 498 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 PRTFDC1Q9NRG1 225 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 SEC14L3Q9UDX4 400 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 SAMHD1Q9Y3Z3 626 aaKnown RBP24.55■■□□□ 1.52
SHOX2-204ENST00000483851 NCOR1O75376 2440 aa24.55■■□□□ 1.52
SHOX2-204ENST00000483851 UNC13CQ8NB66 2214 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 CPED1A4D0V7 1026 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 DNAJB5O75953 348 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 IFNW1P05000 195 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 SH3BGRP55822 239 aaPredicted RBP24.54■■□□□ 1.52
SHOX2-204ENST00000483851 ID2Q02363 134 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 MGAT2Q10469 447 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 FUT5Q11128 374 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 TSEN54Q7Z6J9 526 aaKnown RBP24.54■■□□□ 1.52
SHOX2-204ENST00000483851 TMEM179BQ7Z7N9 219 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 SMYD1Q8NB12 490 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 OR4D9Q8NGE8 314 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 LOXL4Q96JB6 756 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 ZNF354BQ96LW1 612 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 COL21A1Q96P44 957 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 NUDT22Q9BRQ3 303 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 EQTNQ9NQ60 294 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 VNN3Q9NY84 501 aa24.54■■□□□ 1.52
SHOX2-204ENST00000483851 ZNF749O43361 778 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 SLC13A2Q13183 592 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 SNAP47Q5SQN1 464 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 CDRT4Q8N9R6 151 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 OR51Q1Q8NH59 317 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 PELOQ9BRX2 385 aaKnown RBP24.53■■□□□ 1.52
SHOX2-204ENST00000483851 C3orf18Q9UK00 162 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 ENPP4Q9Y6X5 453 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 OR10H2O60403 315 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 SEC24DO94855 1032 aaPredicted RBP24.53■■□□□ 1.52
SHOX2-204ENST00000483851 CHRM4P08173 479 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 RHCEP18577 417 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 GALNSP34059 522 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 XCR1P46094 333 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 DUSP3P51452 185 aaPredicted RBP24.53■■□□□ 1.52
SHOX2-204ENST00000483851 STX4Q12846 297 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 TRMT12Q53H54 448 aaKnown RBP24.53■■□□□ 1.52
SHOX2-204ENST00000483851 EID2Q8N6I1 236 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 OR1L3Q8NH93 324 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 ZNF578Q96N58 590 aaPredicted RBP24.53■■□□□ 1.52
SHOX2-204ENST00000483851 MUS81Q96NY9 551 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 OR1F2PQ96R84 312 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 MBOAT4Q96T53 435 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 STACQ99469 402 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 NDC1Q9BTX1 674 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 PIGUQ9H490 435 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 SMURF2Q9HAU4 748 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 SH3GLB1Q9Y371 365 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 FAM32AQ9Y421 112 aaKnown RBP24.53■■□□□ 1.52
SHOX2-204ENST00000483851 U3KQV3 271 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 RP1P56715 2156 aa24.53■■□□□ 1.52
SHOX2-204ENST00000483851 ASXL3Q9C0F0 2248 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms