RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 OR4D1Q15615 310 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 BEX5Q5H9J7 111 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 OR2A2Q6IF42 318 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 MRM1Q6IN84 353 aaKnown RBP9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 MED27Q6P2C8 311 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 TMEM81Q6P7N7 255 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 SCIMPQ6UWF3 145 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 SH2D5Q6ZV89 423 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 GPSM1Q86YR5 675 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 GALNT12Q8IXK2 581 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 UBQLNLQ8IYU4 475 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 TCAIMQ8N3R3 496 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 ZCCHC7Q8N3Z6 543 aaKnown RBP9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 ZNF611Q8N823 705 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 RGMAQ96B86 450 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 ZNF845Q96IR2 970 aaPredicted RBP9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 SFXN2Q96NB2 322 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 SLC39A3Q9BRY0 314 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 NAT9Q9BTE0 207 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 KLHL4Q9C0H6 718 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 PSD3Q9NYI0 1048 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 KLRF1Q9NZS2 232 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 FBXL2Q9UKC9 423 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 CHMP2BQ9UQN3 213 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 LAMP3Q9UQV4 416 aa9.81□□□□□ -0.84
SMARCC1-205ENST00000483847 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.81□□□□□ -0.842e-6■■□□□ 11.7
SMARCC1-205ENST00000483847 A0A0A6YYD5 115 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 PRAMEF25A6NGN4 478 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 FRG2CA6NGY1 282 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 C17orf51A8MQB3 221 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 A8MV72 311 aaPredicted RBP9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 H0YC42 278 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 HS3ST1O14792 307 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 WIPF1O43516 503 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 CDH16O75309 829 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 UGT2B11O75310 529 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 WISP3O95389 354 aaPredicted RBP9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 FAM157CP0CG43 387 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 EPB42P16452 691 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 NAGAP17050 411 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 S1PR1P21453 382 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 TBXA2RP21731 343 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 BSGP35613 385 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 ACVR1BP36896 505 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 GMPRP36959 345 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 ELK3P41970 407 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 TPD52P55327 224 aaPredicted RBP9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 CLDN15P56746 228 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 SRSF2Q01130 221 aaKnown RBP9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 OR5M10Q6IEU7 315 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 SULT1C3Q6IMI6 304 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 AAGABQ6PD74 315 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 NUP54Q7Z3B4 507 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 C17orf47Q8NEP4 570 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 HUS1BQ8NHY5 278 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 OMA1Q96E52 524 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 ZBED6CLQ96FA7 236 aaPredicted RBP9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 PLPPR2Q96GM1 343 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 MTERF1Q99551 399 aaKnown RBP9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 TMEM204Q9BSN7 226 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 ITPAQ9BY32 194 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 DERL2Q9GZP9 239 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 CAB39LQ9H9S4 337 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 CD274Q9NZQ7 290 aa9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 PTBP2Q9UKA9 531 aaKnown RBP9.8□□□□□ -0.84
SMARCC1-205ENST00000483847 MEGF8Q7Z7M0 2845 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 OVOL3O00110 214 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 EMC8O43402 210 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 GPRIN2O60269 458 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 ZIC3O60481 467 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 TMCC2O75069 709 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 NDUFS7O75251 213 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 PIAS1O75925 651 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 GBAP04062 536 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 FAM58BPP0C7Q3 252 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 CD8BP10966 210 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 SRD5A2P31213 254 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 CDKN1AP38936 164 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 SUCLG1P53597 346 aaKnown RBP9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 B3GALT5-AS1P59052 145 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 RPS4XP62701 263 aaKnown RBP9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 PLCXD2Q0VAA5 305 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 SNTA1Q13424 505 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 EXOSC7Q15024 291 aaKnown RBP9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 CYP1B1Q16678 543 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 EXOC3L2Q2M3D2 409 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 PLCZ1Q86YW0 608 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 PDPRQ8NCN5 879 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 LILRB1Q8NHL6 650 aaPredicted RBP9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 AKAP1Q92667 903 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 EXT2Q93063 718 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 CAVIN3Q969G5 261 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 UBE2E3Q969T4 207 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 CD244Q9BZW8 370 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 SLCO5A1Q9H2Y9 848 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 LZTFL1Q9NQ48 299 aa9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 LYARQ9NX58 379 aaKnown RBP9.79□□□□□ -0.84
SMARCC1-205ENST00000483847 DNALI1O14645 258 aaPredicted RBP9.78□□□□□ -0.84
SMARCC1-205ENST00000483847 PHGDHO43175 533 aaKnown RBP9.78□□□□□ -0.84
SMARCC1-205ENST00000483847 ADAM11O75078 769 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms