RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 PIP5K1AQ99755 562 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 IER2Q9BTL4 223 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ROGDIQ9GZN7 287 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 FAM192AQ9GZU8 254 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 RBM38Q9H0Z9 239 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 DUSP15Q9H1R2 295 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 LYRM4Q9HD34 91 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZSCAN32Q9NX65 697 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 SEC14L3Q9UDX4 400 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 CHST2Q9Y4C5 530 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 TMEM184BQ9Y519 407 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 RNF215Q9Y6U7 377 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ENPP4Q9Y6X5 453 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 RP1P56715 2156 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 PIEZO1Q92508 2521 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 TRIM64CA6NLI5 447 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 H3BSA7 217 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 M0R3H8 397 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ADAMDEC1O15204 470 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 FOXS1O43638 330 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 CDC123O75794 336 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 DNAJB5O75953 348 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 IFNW1P05000 195 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 CT62P0C5K7 136 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 POU2F1P14859 743 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ETS2P15036 469 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 CRHBPP24387 322 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 GABRA4P48169 554 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 DHPSP49366 369 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 HMGA2P52926 109 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 RAD23AP54725 363 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 NR1H2P55055 460 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 LSM11P83369 360 aaKnown RBP eCLIP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 MAT1AQ00266 395 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 BNC1Q01954 994 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 CHRNEQ04844 493 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 CSTF1Q05048 431 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 PIGFQ07326 219 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ERV3-1Q14264 604 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 KCNAB1Q14722 419 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ANGPT1Q15389 498 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 SHBQ15464 509 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 SYT16Q17RD7 645 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 MFSD12Q6NUT3 480 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 SLC30A8Q8IWU4 369 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR2L13Q8N349 312 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZNF555Q8NEP9 628 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR56A1Q8NGH5 318 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 B4GALNT2Q8NHY0 566 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 NCSTNQ92542 709 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ATOH1Q92858 354 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ANKRD9Q96BM1 317 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZNF347Q96SE7 839 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 PRR14Q9BWN1 585 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ING2Q9H160 280 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 SLC38A1Q9H2H9 487 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 NMNAT1Q9HAN9 279 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 KRT84Q9NSB2 600 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 GIMAP4Q9NUV9 329 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 DDX18Q9NVP1 670 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 MS4A12Q9NXJ0 267 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 NTMQ9P121 344 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 LRIT1Q9P2V4 623 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 KCND3Q9UK17 655 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 TRBV4-1A0A0J9YWV2 114 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 LILRA5A6NI73 299 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 E9PQ18 207 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 TGFBR3LH3BV60 316 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 BCKDKO14874 412 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 HTR1AP08908 422 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 ITGAMP11215 1152 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 PORP16435 677 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 RHCEP18577 417 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 TLX1P31314 330 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 ALDH3B2P48448 385 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 GSSP48637 474 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 KHKP50053 298 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 CRISP3P54108 245 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 C21orf59P57076 290 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR1D5P58170 312 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 KCNC4Q03721 635 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 EPS8Q12929 822 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 TMED1Q13445 227 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 PIN1Q13526 163 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 SEC23BQ15437 767 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 MICAQ29983 383 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 CNPY1Q3B7I2 92 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 C14orf28Q4W4Y0 310 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 GPAT3Q53EU6 434 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF628Q5EBL2 1059 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 WDR45BQ5MNZ6 344 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 FHL5Q5TD97 284 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 BHLHB9Q6PI77 547 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 RBM44Q6ZP01 1051 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 LGI4Q8N135 537 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 TTC29Q8NA56 475 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR10G2Q8NGC3 310 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 GIPC3Q8TF64 312 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF354BQ96LW1 612 aa8.27□□□□□ -1.09
CDC42SE1-204ENST00000483763 ADNPQ9H2P0 1102 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms