RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 CNIH2Q6PI25 160 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 TEX261Q6UWH6 196 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 ZNF730Q6ZMV8 503 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 SYT14Q8NB59 555 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 SETD7Q8WTS6 366 aaKnown RBP17.06■□□□□ 0.32
SSR4-209ENST00000482902 SLC38A5Q8WUX1 472 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 AKAP1Q92667 903 aaKnown RBP eCLIP17.06■□□□□ 0.32
SSR4-209ENST00000482902 ZSWIM3Q96MP5 696 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 MED18Q9BUE0 208 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 SLAMF7Q9NQ25 335 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 MALT1Q9UDY8 824 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 ASF1AQ9Y294 204 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 YARS2Q9Y2Z4 477 aaKnown RBP17.06■□□□□ 0.32
SSR4-209ENST00000482902 PCDHGB7Q9Y5F8 929 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 U3KQ87 197 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 LOC102723532A0A0G2JNH3 316 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 ANKDD1BA6NHY2 528 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 HIDE1A8MVS5 230 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 I3L521 148 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 RTCAO00442 366 aaKnown RBP17.05■□□□□ 0.32
SSR4-209ENST00000482902 CSF2RAP15509 400 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 ACADLP28330 430 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 PRMT2P55345 433 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 ST8SIA6P61647 398 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 TMEM65Q6PI78 240 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 KCTD20Q7Z5Y7 419 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 KRT78Q8N1N4 520 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 SLC37A3Q8NCC5 494 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 ZNF680Q8NEM1 530 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 APOBEC4Q8WW27 367 aaKnown RBP17.05■□□□□ 0.32
SSR4-209ENST00000482902 RERGLQ9H628 205 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 SAGE1Q9NXZ1 904 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 PLPP1O14494 284 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 CPEP16870 476 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 DDCP20711 480 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 SOX9P48436 509 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 DGKGP49619 791 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 RAB25P57735 213 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 NTHL1P78549 312 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 C1DQ13901 141 aaKnown RBP17.05■□□□□ 0.32
SSR4-209ENST00000482902 FAM83HQ6ZRV2 1179 aaPredicted RBP17.05■□□□□ 0.32
SSR4-209ENST00000482902 ADGRF3Q8IZF5 1079 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 GPR32P1Q8NGA4 272 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 NEURL3Q96EH8 262 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 TMEM19Q96HH6 336 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 KCTD7Q96MP8 289 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 KCNJ15Q99712 375 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 TMEM43Q9BTV4 400 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 PPIL3Q9H2H8 161 aaKnown RBP17.05■□□□□ 0.32
SSR4-209ENST00000482902 AHSPQ9NZD4 102 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 NDOR1Q9UHB4 597 aa17.05■□□□□ 0.32
SSR4-209ENST00000482902 BTN3A3O00478 584 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 FABP7O15540 132 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 SH3BP5O60239 455 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 TSPAN9O75954 239 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 SOX14O95416 240 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 PAPLNO95428 1278 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 FGF19O95750 216 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 ADAP00813 363 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 CHRM5P08912 532 aaPredicted RBP17.04■□□□□ 0.32
SSR4-209ENST00000482902 MANFP55145 182 aaKnown RBP17.04■□□□□ 0.32
SSR4-209ENST00000482902 ERVFC1P60507 584 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 PPP3R1P63098 170 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 ALDH6A1Q02252 535 aaKnown RBP17.04■□□□□ 0.32
SSR4-209ENST00000482902 ANGPT1Q15389 498 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 BCDIN3DQ7Z5W3 292 aaKnown RBP17.04■□□□□ 0.32
SSR4-209ENST00000482902 FAM129CQ86XR2 697 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 OR5AR1Q8NGP9 310 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 OR52P1PQ8NH57 321 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 AP3S1Q92572 193 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 RAB8BQ92930 207 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 AIFM2Q9BRQ8 373 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 ABCG4Q9H172 646 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 DPEP2Q9H4A9 486 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 A4GALTQ9NPC4 353 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 REV1Q9UBZ9 1251 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 PRKAB1Q9Y478 270 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 LAMA2P24043 3122 aaKnown RBP17.04■□□□□ 0.32
SSR4-209ENST00000482902 CIB4A0PJX0 185 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 MMP20O60882 483 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 IGFBP1P08833 259 aaPredicted RBP17.04■□□□□ 0.32
SSR4-209ENST00000482902 CISD3P0C7P0 127 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 ACRP10323 421 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 C6P13671 934 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 OSMP13725 252 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 AGFG1P52594 562 aaKnown RBP17.04■□□□□ 0.32
SSR4-209ENST00000482902 CAV3P56539 151 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 SUZ12Q15022 739 aaKnown RBP17.04■□□□□ 0.32
SSR4-209ENST00000482902 DHCR24Q15392 516 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 SEC23BQ15437 767 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 LCTLQ6UWM7 567 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 OR8H3Q8N146 312 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 TOR1AIP2Q8NFQ8 470 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 OR2L2Q8NH16 312 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 OR5P2Q8WZ92 322 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 ARRDC3Q96B67 414 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 LINC00615Q96LM1 132 aaPredicted RBP17.04■□□□□ 0.32
SSR4-209ENST00000482902 TSSK6Q9BXA6 273 aa17.04■□□□□ 0.32
SSR4-209ENST00000482902 RSPO3Q9BXY4 272 aaPredicted RBP17.04■□□□□ 0.32
SSR4-209ENST00000482902 RPL36Q9Y3U8 105 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms