RNA–Protein interactions for RNA: ENST00000481070.1

KCNMA1-220, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2 BASIC

Gene KCNMA1, Length 896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-220ENST00000481070 LIN28AQ9H9Z2 209 aaKnown RBP17.88■□□□□ 0.45
KCNMA1-220ENST00000481070 COPS7AQ9UBW8 275 aa17.88■□□□□ 0.45
KCNMA1-220ENST00000481070 DTX4Q9Y2E6 619 aa17.88■□□□□ 0.45
KCNMA1-220ENST00000481070 COL6A6A6NMZ7 2263 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 A0A087WV62 115 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 TRBV11-1A0A0K0K1C0 115 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 ZNF891A8MT65 544 aaPredicted RBP17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 FXYD1O00168 92 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 PCDH17O14917 1159 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 RRP8O43159 456 aaKnown RBP17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 UNC5CO95185 931 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 MTPNP58546 118 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 ZNF155Q12901 538 aaPredicted RBP17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 LASP1Q14847 261 aaKnown RBP17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 RUNDC3AQ59EK9 446 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 TMEM64Q6YI46 380 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 RNF130Q86XS8 419 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 ZNF615Q8N8J6 731 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 OR56A1Q8NGH5 318 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 SFXN5Q8TD22 340 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 ZFP90Q8TF47 636 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 THAP3Q8WTV1 239 aaPredicted RBP17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 JADE3Q92613 823 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 SLC35G5Q96KT7 338 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 IMMP1LQ96LU5 166 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 TPT1P8Q9HAU6 139 aa17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 ZNF223Q9UK11 482 aaPredicted RBP17.87■□□□□ 0.45
KCNMA1-220ENST00000481070 PTPN13Q12923 2485 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 TRBV5-3A0A0A0MS03 114 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 ARGFXA6NJG6 315 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 CLIC1O00299 241 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 PRAMEF2O60811 474 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 SLITRK5O94991 958 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 HPP00738 406 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 IGKV3-11P04433 115 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 HMGN2P05204 90 aaKnown RBP17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 ZCCHC18P0CG32 403 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 EMDP50402 254 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 GPR143P51810 404 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 SLC37A1P57057 533 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 Q0VFX4 171 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 CDC20Q12834 499 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 BNIP1Q12981 228 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 CHAF1BQ13112 559 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 COX20Q5RI15 118 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 SAXO2Q658L1 398 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 NANOGP8Q6NSW7 305 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 C9orf40Q8IXQ3 194 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 APCDD1LQ8NCL9 501 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 RBM15BQ8NDT2 890 aaKnown RBP17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 OR7G1Q8NGA0 311 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 C16orf52Q8NHV5 167 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 ROPN1LQ96C74 230 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 GIMAP5Q96F15 307 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 VMP1Q96GC9 406 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 VPS50Q96JG6 964 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 ANKRD27Q96NW4 1050 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 MS4A4EQ96PG1 132 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 PHF12Q96QT6 1004 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 GAL3ST4Q96RP7 486 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 THUMPD3Q9BV44 507 aaKnown RBP17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 IKZF5Q9H5V7 419 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 EPS8L2Q9H6S3 715 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 NANOGQ9H9S0 305 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 FOLH1BQ9HBA9 442 aa17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 HEMK1Q9Y5R4 338 aaPredicted RBP17.86■□□□□ 0.45
KCNMA1-220ENST00000481070 COQ9O75208 318 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 KRT16P08779 473 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 MATN1P21941 496 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 ITPKBP27987 946 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 CLCN2P51788 898 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 MNAT1P51948 309 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 PSME3P61289 254 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 EXT1Q16394 746 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 NNATQ16517 81 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 DEFB109BQ30KR1 87 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 RABL3Q5HYI8 236 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 TNFAIP8L2Q6P589 184 aaPredicted RBP17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 CCDC81Q6ZN84 652 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 LRRC69Q6ZNQ3 347 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 ZSCAN1Q8NBB4 408 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 OR5D16Q8NGK9 328 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 DNAJB8Q8NHS0 232 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 SLC39A7Q92504 469 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 SLC9A6Q92581 669 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 NACC2Q96BF6 587 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 MOAP1Q96BY2 351 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 NEURL3Q96EH8 262 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 CPPED1Q9BRF8 314 aaPredicted RBP17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 ITPAQ9BY32 194 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 SERHL2Q9H4I8 314 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 PIF1Q9H611 641 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 GPATCH2Q9NW75 528 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 PACSIN3Q9UKS6 424 aa17.85■□□□□ 0.45
KCNMA1-220ENST00000481070 A0A1W2PQ72 361 aa17.84■□□□□ 0.45
KCNMA1-220ENST00000481070 A8MUI8 341 aa17.84■□□□□ 0.45
KCNMA1-220ENST00000481070 BCAS2O75934 225 aaPredicted RBP17.84■□□□□ 0.45
KCNMA1-220ENST00000481070 KRT75O95678 551 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms