RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 YTHDF1Q9BYJ9 559 aaKnown RBP10.31□□□□□ -0.76
VTI1A-204ENST00000480057 SPRTNQ9H040 489 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-204ENST00000480057 RUBCNLQ9H714 662 aa10.31□□□□□ -0.76
VTI1A-204ENST00000480057 EVA1AQ9H8M9 152 aa10.31□□□□□ -0.76
VTI1A-204ENST00000480057 VNN3Q9NY84 501 aa10.31□□□□□ -0.76
VTI1A-204ENST00000480057 UBAP1Q9NZ09 502 aa10.31□□□□□ -0.76
VTI1A-204ENST00000480057 KCND3Q9UK17 655 aa10.31□□□□□ -0.76
VTI1A-204ENST00000480057 GMEB2Q9UKD1 530 aa10.31□□□□□ -0.76
VTI1A-204ENST00000480057 AK5Q9Y6K8 562 aa10.31□□□□□ -0.76
VTI1A-204ENST00000480057 U3KQA8 63 aa10.31□□□□□ -0.76
VTI1A-204ENST00000480057 SCN3AQ9NY46 2000 aa10.31□□□□□ -0.76
VTI1A-204ENST00000480057 GOLGA4Q13439 2230 aaKnown RBP10.3□□□□□ -0.76
VTI1A-204ENST00000480057 TMEM150CB9EJG8 249 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 FAM227AF5H4B4 570 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 TNFRSF11BO00300 401 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 DSCR3O14972 297 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 SLC16A6O15403 523 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 OR10H2O60403 315 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 JRKO75564 520 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 CHRM4P08173 479 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 ALOX5P09917 674 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 UBTFL6P0CB48 400 aaPredicted RBP10.3□□□□□ -0.76
VTI1A-204ENST00000480057 ZNF883P0CG24 379 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 SP9P0CG40 484 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 ITGAMP11215 1152 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 CKMT1AP12532 417 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 PRKAR1BP31321 381 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 RRM2P31350 389 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 MAP3K8P41279 467 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 STT3AP46977 705 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 IST1P53990 364 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 HPCAP84074 193 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 STX4Q12846 297 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 DSG2Q14126 1118 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 DUSP7Q16829 419 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 PROX2Q3B8N5 592 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 GPAT3Q53EU6 434 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 KDM4DQ6B0I6 523 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 GUSBP11Q6P575 273 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 FAHD1Q6P587 224 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 TMEM154Q6P9G4 183 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 DHRS4L2Q6PKH6 230 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 C16orf62Q7Z3J2 963 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 ARHGAP22Q7Z5H3 698 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 SLC44A2Q8IWA5 706 aaPredicted RBP10.3□□□□□ -0.76
VTI1A-204ENST00000480057 GALNT12Q8IXK2 581 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 VWA5B2Q8N398 1253 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 ZNF555Q8NEP9 628 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 SLC35A4Q96G79 324 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 C16orf58Q96GQ5 468 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 PEX11GQ96HA9 241 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 DHRS1Q96LJ7 313 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 NDC1Q9BTX1 674 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 LMF2Q9BU23 707 aaKnown RBP10.3□□□□□ -0.76
VTI1A-204ENST00000480057 SLC38A1Q9H2H9 487 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 LRRN3Q9H3W5 708 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 CXorf21Q9HAI6 301 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 CACYBPQ9HB71 228 aaKnown RBP10.3□□□□□ -0.76
VTI1A-204ENST00000480057 HCN3Q9P1Z3 774 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 KLHL3Q9UH77 587 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 TMEFF2Q9UIK5 374 aaPredicted RBP10.3□□□□□ -0.76
VTI1A-204ENST00000480057 ACAD8Q9UKU7 415 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 SRPK3Q9UPE1 567 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 SLC9A8Q9Y2E8 581 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 IFT52Q9Y366 437 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 SH3GLB1Q9Y371 365 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 PCDHGB2Q9Y5G2 931 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 PCDHGA5Q9Y5G8 931 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 LYVE1Q9Y5Y7 322 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 KNL1Q8NG31 2342 aa10.3□□□□□ -0.76
VTI1A-204ENST00000480057 ADAMTS20P59510 1910 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 PRAMEF25A6NGN4 478 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 GALR2O43603 387 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-204ENST00000480057 HS6ST1O60243 411 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 NKX2-2O95096 273 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 H6PDO95479 791 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 SNAP29O95721 258 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 LGI1O95970 557 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 RECKO95980 971 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 ALPPP05187 535 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 THBS1P07996 1170 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 PABPC4LP0CB38 370 aaKnown RBP10.29□□□□□ -0.76
VTI1A-204ENST00000480057 ACP2P11117 423 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 ANXA8P13928 327 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 FOLR1P15328 257 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 IGFBP5P24593 272 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 LIMS1P48059 325 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 GTF2A1P52655 376 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-204ENST00000480057 MYBPC1Q00872 1141 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 ID2Q02363 134 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 SLC13A2Q13183 592 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 PUM1Q14671 1186 aaKnown RBP eCLIP10.29□□□□□ -0.76
VTI1A-204ENST00000480057 KCTD21Q4G0X4 260 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 TRMT12Q53H54 448 aaKnown RBP10.29□□□□□ -0.76
VTI1A-204ENST00000480057 TRIM61Q5EBN2 209 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 COLEC12Q5KU26 742 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 QSOX2Q6ZRP7 698 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 BPHLQ86WA6 291 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-204ENST00000480057 SMYD1Q8NB12 490 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 PIK3C3Q8NEB9 887 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms