RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 FGFBP1Q14512 234 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 OR4D1Q15615 310 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 NNATQ16517 81 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 BEX5Q5H9J7 111 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 NUDT13Q86X67 352 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 IGFBPL1Q8WX77 278 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 OMA1Q96E52 524 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 PGM2Q96G03 612 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 NODALQ96S42 347 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 PIGQQ9BRB3 760 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 NXF5Q9H1B4 397 aaKnown RBP14.57□□□□□ -0.08
DDX56-210ENST00000479440 OPN3Q9H1Y3 402 aaPredicted RBP14.57□□□□□ -0.08
DDX56-210ENST00000479440 DKKL1Q9UK85 242 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 ASB4Q9Y574 426 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 TEX264Q9Y6I9 313 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 FREM3P0C091 2139 aa14.57□□□□□ -0.08
DDX56-210ENST00000479440 EXPH5Q8NEV8 1989 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 STAB1Q9NY15 2570 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 SLC22A20A6NK97 555 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 WASHC1A8K0Z3 465 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 K7EPI3 171 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 ACOX3O15254 700 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 TMPRSS11DO60235 418 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 SOX30O94993 753 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 WISP3O95389 354 aaPredicted RBP14.56□□□□□ -0.08
DDX56-210ENST00000479440 CT62P0C5K7 136 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 NT5EP21589 574 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 CNTFP26441 200 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 LOXP28300 417 aaPredicted RBP14.56□□□□□ -0.08
DDX56-210ENST00000479440 STARP49675 285 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 NR1H2P55055 460 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 CLDN18P56856 261 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 SIRPAP78324 504 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 MORF4L2Q15014 288 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 ETFDHQ16134 617 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 ZNF474Q6S9Z5 364 aaPredicted RBP14.56□□□□□ -0.08
DDX56-210ENST00000479440 ZNF704Q6ZNC4 412 aaPredicted RBP14.56□□□□□ -0.08
DDX56-210ENST00000479440 MYLK4Q86YV6 388 aaPredicted RBP14.56□□□□□ -0.08
DDX56-210ENST00000479440 RNF175Q8N4F7 328 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 REPS1Q96D71 796 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 ZNF845Q96IR2 970 aaPredicted RBP14.56□□□□□ -0.08
DDX56-210ENST00000479440 MTERF1Q99551 399 aaKnown RBP14.56□□□□□ -0.08
DDX56-210ENST00000479440 ZNF717Q9BY31 904 aaPredicted RBP14.56□□□□□ -0.08
DDX56-210ENST00000479440 NUDT4Q9NZJ9 180 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 TSC22D4Q9Y3Q8 395 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 PCDHGA11Q9Y5H2 935 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 WIF1Q9Y5W5 379 aa14.56□□□□□ -0.08
DDX56-210ENST00000479440 ARID1AO14497 2285 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.55□□□□□ -0.08
DDX56-210ENST00000479440 C2orf72A6NCS6 295 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 TLX2O43763 284 aaPredicted RBP14.55□□□□□ -0.08
DDX56-210ENST00000479440 EEDO75530 441 aaKnown RBP14.55□□□□□ -0.08
DDX56-210ENST00000479440 EPB42P16452 691 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 PTX3P26022 381 aaPredicted RBP14.55□□□□□ -0.08
DDX56-210ENST00000479440 ARL4CP56559 192 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 BCL2A1Q16548 175 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 CLEC12BQ2HXU8 276 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 BTLAQ7Z6A9 289 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 PLCZ1Q86YW0 608 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 GBP7Q8N8V2 638 aaPredicted RBP14.55□□□□□ -0.08
DDX56-210ENST00000479440 WDSUB1Q8N9V3 476 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 OR4K14Q8NGD5 310 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 UBTD2Q8WUN7 234 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 TMCO6Q96DC7 493 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 ITPAQ9BY32 194 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 DDX31Q9H8H2 851 aaKnown RBP14.55□□□□□ -0.08
DDX56-210ENST00000479440 CAB39LQ9H9S4 337 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 TXNDC16Q9P2K2 825 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 DTX4Q9Y2E6 619 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 TLN2Q9Y4G6 2542 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 ATRQ13535 2644 aa14.55□□□□□ -0.08
DDX56-210ENST00000479440 UQCRHLA0A096LP55 91 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 A0A1W2PS29 197 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 LRRC14BA6NHZ5 514 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 SUPT3HB4E1H0 165 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 RNF223E7ERA6 249 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 PHGDHO43175 533 aaKnown RBP14.54□□□□□ -0.08
DDX56-210ENST00000479440 ABCB7O75027 752 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 UGT2B11O75310 529 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 SUPT3HO75486 399 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 F12P00748 615 aaPredicted RBP14.54□□□□□ -0.08
DDX56-210ENST00000479440 CD8BP10966 210 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 PPP3CBP16298 524 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 STMN1P16949 149 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 RPS4XP62701 263 aaKnown RBP14.54□□□□□ -0.08
DDX56-210ENST00000479440 CUL3Q13618 768 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 CAPRIN1Q14444 709 aaKnown RBP14.54□□□□□ -0.08
DDX56-210ENST00000479440 MILR1Q7Z6M3 343 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 ANKMY2Q8IV38 441 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 ZNF611Q8N823 705 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 LCORQ96JN0 433 aaPredicted RBP14.54□□□□□ -0.08
DDX56-210ENST00000479440 MCMBPQ9BTE3 642 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 PSD3Q9NYI0 1048 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 MOCS1Q9NZB8 636 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 JRKLQ9Y4A0 524 aa14.54□□□□□ -0.08
DDX56-210ENST00000479440 ANK3Q12955 4377 aaKnown RBP14.54□□□□□ -0.08
DDX56-210ENST00000479440 EFCAB8A8MWE9 144 aa14.53□□□□□ -0.08
DDX56-210ENST00000479440 HS3ST1O14792 307 aa14.53□□□□□ -0.08
DDX56-210ENST00000479440 EMC8O43402 210 aa14.53□□□□□ -0.08
DDX56-210ENST00000479440 CPMP14384 443 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms