RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 LRRC74AQ0VAA2 488 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 TPD52L1Q16890 204 aaPredicted RBP4.31□□□□□ -1.72
UPF3B-203ENST00000478840 TATDN3Q17R31 274 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 USH1GQ495M9 461 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 LINC01620Q4KN68 170 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 TCHHL1Q5QJ38 904 aaPredicted RBP4.31□□□□□ -1.72
UPF3B-203ENST00000478840 TMEM184AQ6ZMB5 413 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 ZFAND4Q86XD8 727 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 EFCAB13Q8IY85 973 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 ZNF519Q8TB69 540 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.31□□□□□ -1.72
UPF3B-203ENST00000478840 RLN3Q8WXF3 142 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 OSTF1Q92882 214 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 ADIPOR1Q96A54 375 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 NSMCE3Q96MG7 304 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 ANKRD27Q96NW4 1050 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 LITAFQ99732 161 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 GPR174Q9BXC1 333 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 DGCR6LQ9BY27 220 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 SMPD3Q9NY59 655 aaPredicted RBP4.31□□□□□ -1.72
UPF3B-203ENST00000478840 COX16Q9P0S2 106 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 CIDEBQ9UHD4 219 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 BAIAP2L1Q9UHR4 511 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 NIP7Q9Y221 180 aaKnown RBP eCLIP4.31□□□□□ -1.72
UPF3B-203ENST00000478840 RRP15Q9Y3B9 282 aaKnown RBP4.31□□□□□ -1.72
UPF3B-203ENST00000478840 FKBP7Q9Y680 259 aa4.31□□□□□ -1.72
UPF3B-203ENST00000478840 CCDC7Q96M83 1385 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 LRRC30A6NM36 301 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 NPIPA2E9PIF3 369 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 H0YL77 283 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 NR5A2O00482 541 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 CLDN5O00501 218 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 CXCL11O14625 94 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 CTAGE5O15320 804 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 HMMRO75330 724 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 UFL1O94874 794 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 MBD3O95983 291 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 OAS1P00973 400 aaKnown RBP4.3□□□□□ -1.72
UPF3B-203ENST00000478840 IGHG1P01857 330 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 UQCRBP14927 111 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 TSPAN8P19075 237 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 CYLC1P35663 651 aaPredicted RBP4.3□□□□□ -1.72
UPF3B-203ENST00000478840 IL24Q13007 206 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 UNC50Q53HI1 259 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 MOB2Q70IA6 237 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 C11orf45Q8TAV5 145 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 HPDLQ96IR7 371 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 RCHY1Q96PM5 261 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 TNFRSF13CQ96RJ3 184 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 ALG12Q9BV10 488 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 NT5DC2Q9H857 520 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 WDR41Q9HAD4 459 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 FGF22Q9HCT0 170 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 POLD4Q9HCU8 107 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 KLRF1Q9NZS2 232 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 RABL2BQ9UNT1 228 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 AP4B1Q9Y6B7 739 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 MYH15Q9Y2K3 1946 aa4.3□□□□□ -1.72
UPF3B-203ENST00000478840 MBLAC1A4D2B0 266 aaPredicted RBP4.29□□□□□ -1.72
UPF3B-203ENST00000478840 LRIT2A6NDA9 550 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 WASHC1A8K0Z3 465 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 RNF212BA8MTL3 300 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 A8MUI8 341 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 K7EQM0 130 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 JAK2O60674 1132 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 IGLV1-44P01699 117 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 CSF2P04141 144 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 PDHBP11177 359 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 RPA2P15927 270 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 PAX7P23759 505 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 CA8P35219 290 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 RFC2P35250 354 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 DLSTP36957 453 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 HTR5AP47898 357 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 EMC2Q15006 297 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 ECSCRQ19T08 205 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 CCDC152Q4G0S7 254 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 ZCCHC7Q8N3Z6 543 aaKnown RBP4.29□□□□□ -1.72
UPF3B-203ENST00000478840 ZNF781Q8N8C0 355 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 ZNRF1Q8ND25 227 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 NABP1Q96AH0 204 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 SENP8Q96LD8 212 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 TTC25Q96NG3 672 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 NAP1L5Q96NT1 182 aaPredicted RBP4.29□□□□□ -1.72
UPF3B-203ENST00000478840 ZNF607Q96SK3 696 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 IWS1Q96ST2 819 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 SYT15Q9BQS2 421 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 ST6GALNAC5Q9BVH7 336 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 SPHK2Q9NRA0 654 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 FAM114A2Q9NRY5 505 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 GHRLQ9UBU3 117 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 DHRS7Q9Y394 339 aa4.29□□□□□ -1.72
UPF3B-203ENST00000478840 C15orf38-AP3S2A0A0A6YYH1 394 aa4.28□□□□□ -1.72
UPF3B-203ENST00000478840 IGLON5A6NGN9 336 aa4.28□□□□□ -1.72
UPF3B-203ENST00000478840 PPIAL4DF5H284 164 aa4.28□□□□□ -1.72
UPF3B-203ENST00000478840 H3BMH7 237 aa4.28□□□□□ -1.72
UPF3B-203ENST00000478840 EI24O14681 340 aa4.28□□□□□ -1.72
UPF3B-203ENST00000478840 TFECO14948 347 aaPredicted RBP4.28□□□□□ -1.72
UPF3B-203ENST00000478840 DUSP11O75319 330 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms