RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PSORS1C1Q9UIG5 152 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 DUSP12Q9UNI6 340 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 SH2B3Q9UQQ2 575 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 RNF6Q9Y252 685 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 ITM2BQ9Y287 266 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 COQ6Q9Y2Z9 468 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 EMC9Q9Y3B6 208 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 FAM32AQ9Y421 112 aaKnown RBP4.68□□□□□ -1.66
SF3B6-202ENST00000478050 TESMINQ9Y4I5 508 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 PCDHGA2Q9Y5H1 932 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 DGKBQ9Y6T7 804 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 ENPP4Q9Y6X5 453 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 MDC1Q14676 2089 aaKnown RBP4.68□□□□□ -1.66
SF3B6-202ENST00000478050 DOCK9Q9BZ29 2069 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 SNRNP200O75643 2136 aaKnown RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TRBC2A0A5B9 178 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 FUOMA2VDF0 154 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 SH3D21A4FU49 640 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 EFCAB10A6NFE3 127 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ANKDD1BA6NHY2 528 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CLCA1A8K7I4 914 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 EFCAB9A8MZ26 197 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 C5orf58C9J3I9 102 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TAF4O00268 1085 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 PLK4O00444 970 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 PEX14O75381 377 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 KLHL18O94889 574 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 GADD45GO95257 159 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 OXSR1O95747 527 aaPredicted RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 VIPP01282 170 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 OPN1SWP03999 348 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 FUCA1P04066 466 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 IFNW1P05000 195 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 LCKP06239 509 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 KLK1P06870 262 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TFPTP0C1Z6 253 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 JMJD7P0C870 316 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 EPCAMP16422 314 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CD36P16671 472 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 DDCP20711 480 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CDH3P22223 829 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CBLP22681 906 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 NR4A1P22736 598 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 EPHA2P29317 976 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CD40LGP29965 261 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 IDUAP35475 653 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ECI1P42126 302 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CTSKP43235 329 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 MAGEA8P43361 318 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 LIMS1P48059 325 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ALDH9A1P49189 494 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CLK1P49759 484 aaKnown RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CCR8P51685 355 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CDH12P55289 794 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CDC42P60953 191 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 VBP1P61758 197 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 GABREP78334 506 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 REEP5Q00765 189 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 MC1RQ01726 317 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CNTN1Q12860 1018 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ITGADQ13349 1161 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ATP1A4Q13733 1029 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 NFE2L1Q14494 772 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 HEPACAMQ14CZ8 416 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 SMAD2Q15796 467 aaKnown RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 SMN1Q16637 294 aaKnown RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TIGD6Q17RP2 521 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 PRSS53Q2L4Q9 553 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 MPEG1Q2M385 716 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 EXOC3L2Q2M3D2 409 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TRIM16LQ309B1 348 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ANKRD39Q53RE8 183 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TRIM61Q5EBN2 209 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TCEAL5Q5H9L2 206 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TOR1AIP1Q5JTV8 583 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 C9orf64Q5T6V5 341 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 DEPDC1Q5TB30 811 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 KHDRBS2Q5VWX1 349 aaKnown RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 SAXO2Q658L1 398 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 REEP3Q6NUK4 255 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TUBA3EQ6PEY2 450 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ZC3H14Q6PJT7 736 aaKnown RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 LHFPL2Q6ZUX7 228 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 USP53Q70EK8 1073 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 USP43Q70EL4 1123 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ERN2Q76MJ5 926 aaKnown RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF367Q7RTV3 350 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 GRASPQ7Z6J2 395 aaPredicted RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TSEN54Q7Z6J9 526 aaKnown RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TRIM74Q86UV6 250 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 LRRTM4Q86VH4 590 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 AMZ2Q86W34 360 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 RNF130Q86XS8 419 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF547Q8IVP9 402 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 SLC44A2Q8IWA5 706 aaPredicted RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 RBM12BQ8IXT5 1001 aaKnown RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TAGAPQ8N103 731 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 RAB42Q8N4Z0 105 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 SLC5A8Q8N695 610 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF366Q8N895 744 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms