RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 TINAGQ9UJW2 476 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 UTS2RQ9UKP6 389 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 SLC5A6Q9Y289 635 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 MYO7BQ6PIF6 2116 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 ATP6AP2A0A1C7CYW4 349 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 GNG14A0A1W2PPG7 69 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 FAM166BA8MTA8 275 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 ATP6AP2O75787 350 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 PDE9AO76083 593 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 CBX7O95931 251 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 STSP08842 583 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 PCSK2P16519 638 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 SF3A3Q12874 501 aaKnown RBP eCLIP16.28■□□□□ 0.2
PTPN7-209ENST00000477554 KIAA0040Q15053 153 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 SMU1Q2TAY7 513 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 PRAMEF20Q5VT98 475 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 NXNQ6DKJ4 435 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 LARP4Q71RC2 724 aaKnown RBP eCLIP16.28■□□□□ 0.2
PTPN7-209ENST00000477554 CCDC116Q8IYX3 515 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 HORMAD2Q8N7B1 307 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 OR2M7Q8NG81 312 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 OR10G3Q8NGC4 313 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 C16orf52Q8NHV5 167 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.28■□□□□ 0.2
PTPN7-209ENST00000477554 NUDT8Q8WV74 236 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 KAT2AQ92830 837 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 ADIPOR1Q96A54 375 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 EBF4Q9BQW3 602 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 BRINP2Q9C0B6 783 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 OR10A5Q9H207 317 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 WDR55Q9H6Y2 383 aaPredicted RBP16.28■□□□□ 0.2
PTPN7-209ENST00000477554 AKTIPQ9H8T0 292 aa16.28■□□□□ 0.2
PTPN7-209ENST00000477554 GOLGA8QA0A0J9YX86 632 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 GOLGA8OA6NCC3 632 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 GOLGA8NF8WBI6 632 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 LSM1O15116 133 aaKnown RBP16.27■□□□□ 0.19
PTPN7-209ENST00000477554 ZG16O60844 167 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 CELA3AP09093 270 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 ANXA4P09525 319 aaPredicted RBP16.27■□□□□ 0.19
PTPN7-209ENST00000477554 ZNF24P17028 368 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 MAD2L1Q13257 205 aaPredicted RBP16.27■□□□□ 0.19
PTPN7-209ENST00000477554 C3AR1Q16581 482 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 MPEG1Q2M385 716 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 LSM12Q3MHD2 195 aaKnown RBP16.27■□□□□ 0.19
PTPN7-209ENST00000477554 C4orf17Q53FE4 359 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 SPIN4Q56A73 249 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 CMPK2Q5EBM0 449 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 GALNT18Q6P9A2 607 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 C3P1Q6ZMU1 363 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 ANKS4BQ8N8V4 417 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 ZFP62Q8NB50 900 aaPredicted RBP16.27■□□□□ 0.19
PTPN7-209ENST00000477554 OR5L2Q8NGL0 311 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 OR9A2Q8NGT5 310 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 LRTM1Q9HBL6 345 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 C1orf109Q9NX04 203 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 ZNF639Q9UID6 485 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 TRIM33Q9UPN9 1127 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 ARL2BPQ9Y2Y0 163 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 KLF13Q9Y2Y9 288 aaPredicted RBP16.27■□□□□ 0.19
PTPN7-209ENST00000477554 TMED5Q9Y3A6 229 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 HRH3Q9Y5N1 445 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 LIPGQ9Y5X9 500 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 DOPEY1Q5JWR5 2465 aa16.27■□□□□ 0.19
PTPN7-209ENST00000477554 SPTBN1Q01082 2364 aaKnown RBP16.26■□□□□ 0.19
PTPN7-209ENST00000477554 ZNF407Q9C0G0 2248 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 CRYBG3Q68DQ2 2970 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 GTF3C1Q12789 2109 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 TRGV8A0A0C4DH27 118 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 SYNDIG1LA6NDD5 238 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 ASNA1O43681 348 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 PEX11AO75192 247 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 SEC22BO75396 215 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 ATP1B1P05026 303 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 LBPP18428 481 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 GPX3P22352 226 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 GALNSP34059 522 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 FBXW4P57775 412 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 TRA2BP62995 288 aaKnown RBP16.26■□□□□ 0.19
PTPN7-209ENST00000477554 GALNTL6Q49A17 601 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 METTL21CQ5VZV1 264 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 ANKRD26P1Q6NSI1 321 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 VWA5B2Q8N398 1253 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 CCDC197Q8NCU1 140 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 GFM2Q969S9 779 aaKnown RBP16.26■□□□□ 0.19
PTPN7-209ENST00000477554 OR52B2Q96RD2 323 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 PELOQ9BRX2 385 aaKnown RBP16.26■□□□□ 0.19
PTPN7-209ENST00000477554 ITPAQ9BY32 194 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 NXF5Q9H1B4 397 aaKnown RBP16.26■□□□□ 0.19
PTPN7-209ENST00000477554 DEFB127Q9H1M4 99 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 TIMMDC1Q9NPL8 285 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 TUBA8Q9NY65 449 aaPredicted RBP16.26■□□□□ 0.19
PTPN7-209ENST00000477554 CHCHD2Q9Y6H1 151 aaPredicted RBP16.26■□□□□ 0.19
PTPN7-209ENST00000477554 NINQ8N4C6 2090 aa16.26■□□□□ 0.19
PTPN7-209ENST00000477554 C2orf92A0A1B0GVN3 265 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 SLC19A2O60779 497 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 FBXO45P0C2W1 286 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 CSNK2A2P19784 350 aaPredicted RBP16.25■□□□□ 0.19
PTPN7-209ENST00000477554 FOXO1Q12778 655 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 BIKQ13323 160 aa16.25■□□□□ 0.19
PTPN7-209ENST00000477554 CDSNQ15517 529 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms