RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CDK9P50750 372 aaKnown RBP27.34■■□□□ 1.97
HOXB3-208ENST00000476342 NR0B1P51843 470 aaKnown RBP27.34■■□□□ 1.97
HOXB3-208ENST00000476342 NRG3P56975 720 aa27.34■■□□□ 1.97
HOXB3-208ENST00000476342 ZNF468Q5VIY5 522 aaPredicted RBP27.34■■□□□ 1.97
HOXB3-208ENST00000476342 ZNF317Q96PQ6 595 aaPredicted RBP27.34■■□□□ 1.97
HOXB3-208ENST00000476342 HPF1Q9NWY4 346 aa27.34■■□□□ 1.97
HOXB3-208ENST00000476342 TRIM33Q9UPN9 1127 aa27.34■■□□□ 1.97
HOXB3-208ENST00000476342 C6orf47O95873 294 aa27.33■■□□□ 1.97
HOXB3-208ENST00000476342 SOX3P41225 446 aa27.33■■□□□ 1.97
HOXB3-208ENST00000476342 MRPL19P49406 292 aaKnown RBP27.33■■□□□ 1.97
HOXB3-208ENST00000476342 CYP4Z2PQ8N1L4 340 aa27.33■■□□□ 1.97
HOXB3-208ENST00000476342 LCORQ96JN0 433 aaPredicted RBP27.33■■□□□ 1.97
HOXB3-208ENST00000476342 FAM120CQ9NX05 1096 aaKnown RBP27.33■■□□□ 1.97
HOXB3-208ENST00000476342 PCDHGB4Q9UN71 923 aa27.33■■□□□ 1.97
HOXB3-208ENST00000476342 ERVK-11Q9UQG0 969 aa27.33■■□□□ 1.97
HOXB3-208ENST00000476342 IL12AP29459 219 aa27.33■■□□□ 1.96
HOXB3-208ENST00000476342 PPICP45877 212 aa27.33■■□□□ 1.96
HOXB3-208ENST00000476342 PRR5P85299 388 aa27.33■■□□□ 1.96
HOXB3-208ENST00000476342 ZNF155Q12901 538 aaPredicted RBP27.33■■□□□ 1.96
HOXB3-208ENST00000476342 SZRD1Q7Z422 152 aa27.33■■□□□ 1.96
HOXB3-208ENST00000476342 PSMA8Q8TAA3 256 aa27.33■■□□□ 1.96
HOXB3-208ENST00000476342 CHMP6Q96FZ7 201 aa27.33■■□□□ 1.96
HOXB3-208ENST00000476342 SIGLEC12Q96PQ1 595 aa27.33■■□□□ 1.96
HOXB3-208ENST00000476342 TMEM120AQ9BXJ8 343 aa27.33■■□□□ 1.96
HOXB3-208ENST00000476342 FOLH1BQ9HBA9 442 aa27.33■■□□□ 1.96
HOXB3-208ENST00000476342 NUP214P35658 2090 aaPredicted RBP27.32■■□□□ 1.96
HOXB3-208ENST00000476342 PRSS51A0A1B0GVH4 220 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 EMC8O43402 210 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 PSMG1O95456 288 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 NADKO95544 446 aaPredicted RBP27.32■■□□□ 1.96
HOXB3-208ENST00000476342 IL6P05231 212 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 PGRP06401 933 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 CD46P15529 392 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 WNT3P56703 355 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 PLEKHN1Q494U1 663 aaPredicted RBP27.32■■□□□ 1.96
HOXB3-208ENST00000476342 SPINK14Q6IE38 97 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 IL20RBQ6UXL0 311 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 DND1Q8IYX4 353 aaKnown RBP27.32■■□□□ 1.96
HOXB3-208ENST00000476342 ZNF843Q8N446 348 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 MDS2Q8NDY4 140 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 NUP43Q8NFH3 380 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 TMEM125Q96AQ2 219 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 HSPBAP1Q96EW2 488 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 C5orf34Q96MH7 638 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 VSTM2LQ96N03 204 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 NXF5Q9H1B4 397 aaKnown RBP27.32■■□□□ 1.96
HOXB3-208ENST00000476342 SIRT3Q9NTG7 399 aaPredicted RBP27.32■■□□□ 1.96
HOXB3-208ENST00000476342 NTMQ9P121 344 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 SNX8Q9Y5X2 465 aa27.32■■□□□ 1.96
HOXB3-208ENST00000476342 ACOX3O15254 700 aa27.31■■□□□ 1.96
HOXB3-208ENST00000476342 ERN1O75460 977 aaKnown RBP27.31■■□□□ 1.96
HOXB3-208ENST00000476342 SLC25A12O75746 678 aa27.31■■□□□ 1.96
HOXB3-208ENST00000476342 NEURL1O76050 574 aa27.31■■□□□ 1.96
HOXB3-208ENST00000476342 OR6B1O95007 311 aa27.31■■□□□ 1.96
HOXB3-208ENST00000476342 ABCB1P08183 1280 aaPredicted RBP27.31■■□□□ 1.96
HOXB3-208ENST00000476342 TMED10P49755 219 aaKnown RBP27.31■■□□□ 1.96
HOXB3-208ENST00000476342 ATP4BP51164 291 aa27.31■■□□□ 1.96
HOXB3-208ENST00000476342 ARFIP2P53365 341 aa27.31■■□□□ 1.96
HOXB3-208ENST00000476342 PSPHP78330 225 aa27.31■■□□□ 1.96
HOXB3-208ENST00000476342 ZNHIT3Q15649 155 aaPredicted RBP27.31■■□□□ 1.96
HOXB3-208ENST00000476342 ZNF766Q5HY98 468 aa27.31■■□□□ 1.96
HOXB3-208ENST00000476342 CGB2Q6NT52 195 aa27.31■■□□□ 1.96
HOXB3-208ENST00000476342 MS4A4EQ96PG1 132 aa27.31■■□□□ 1.96
HOXB3-208ENST00000476342 BTBD9Q96Q07 612 aa27.31■■□□□ 1.96
HOXB3-208ENST00000476342 PCDHGB6Q9Y5F9 930 aa27.31■■□□□ 1.96
HOXB3-208ENST00000476342 FRG2CA6NGY1 282 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 CAPN14A8MX76 684 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 C9JVG2 144 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 ZNF354AO60765 605 aaPredicted RBP27.3■■□□□ 1.96
HOXB3-208ENST00000476342 C1QL1O75973 258 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 NCF2P19878 526 aaPredicted RBP27.3■■□□□ 1.96
HOXB3-208ENST00000476342 DRD5P21918 477 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 HBA1P69905 142 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 LRRC74AQ0VAA2 488 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 SQLEQ14534 574 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 NNATQ16517 81 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 PAOXQ6QHF9 649 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 TMEM64Q6YI46 380 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 CLECL1Q8IZS7 167 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 TMEM178AQ8NBL3 297 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 MOAP1Q96BY2 351 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 FAM120BQ96EK7 910 aaKnown RBP27.3■■□□□ 1.96
HOXB3-208ENST00000476342 OR52E6Q96RD3 313 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 ZCCHC3Q9NUD5 404 aaKnown RBP27.3■■□□□ 1.96
HOXB3-208ENST00000476342 LUZP4Q9P127 313 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 KLHL14Q9P2G3 628 aa27.3■■□□□ 1.96
HOXB3-208ENST00000476342 GPR55Q9Y2T6 319 aaPredicted RBP27.3■■□□□ 1.96
HOXB3-208ENST00000476342 COPG1Q9Y678 874 aaKnown RBP27.3■■□□□ 1.96
HOXB3-208ENST00000476342 B8ZZF3 427 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 SCN2BO60939 215 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 DGKQP52824 942 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 PRKAG1P54619 331 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 GYS2P54840 703 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 PHC1P78364 1004 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 SPDYE7PQ495Y7 208 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 METTL21CQ5VZV1 264 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 Q8NA96 180 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 OR4A15Q8NGL6 344 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 OR9I1Q8NGQ6 314 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 SPACA9Q96E40 222 aaPredicted RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms