RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 UBQLN3Q9H347 655 aa14.28□□□□□ -0.12
SRRT-209ENST00000474896 DDX31Q9H8H2 851 aaKnown RBP14.28□□□□□ -0.12
SRRT-209ENST00000474896 PLEKHF2Q9H8W4 249 aa14.28□□□□□ -0.12
SRRT-209ENST00000474896 WDR41Q9HAD4 459 aa14.28□□□□□ -0.12
SRRT-209ENST00000474896 CXorf21Q9HAI6 301 aa14.28□□□□□ -0.12
SRRT-209ENST00000474896 TEX10Q9NXF1 929 aaPredicted RBP14.28□□□□□ -0.12
SRRT-209ENST00000474896 TSC22D4Q9Y3Q8 395 aa14.28□□□□□ -0.12
SRRT-209ENST00000474896 PCDHGA11Q9Y5H2 935 aa14.28□□□□□ -0.12
SRRT-209ENST00000474896 HRNRQ86YZ3 2850 aaPredicted RBP14.27□□□□□ -0.12
SRRT-209ENST00000474896 FLNAP21333 2647 aaKnown RBP14.27□□□□□ -0.13
SRRT-209ENST00000474896 A0A1W2PS29 197 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 CCDC189A1A4V9 331 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 GOLGA6L10A6NI86 522 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 CD8B2A6NJW9 211 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 EEF1E1-BLOC1S5C9J1V9 151 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 EEF1E1O43324 174 aaKnown RBP14.27□□□□□ -0.13
SRRT-209ENST00000474896 GLRA3O75311 464 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 SASH3O75995 380 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 AIFM1O95831 613 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 GBAP04062 536 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 NR2F6P10588 404 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 OPRM1P35372 400 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 PHEXP78562 749 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 SLC18A2Q05940 514 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 LTBQ06643 244 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 SETDB1Q15047 1291 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 TNFAIP8L3Q5GJ75 292 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 TECRLQ5HYJ1 363 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 NHSL2Q5HYW2 709 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 WIPI1Q5MNZ9 446 aaPredicted RBP14.27□□□□□ -0.13
SRRT-209ENST00000474896 Q71RC1 249 aaPredicted RBP14.27□□□□□ -0.13
SRRT-209ENST00000474896 PRR22Q8IZ63 422 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 RHEBL1Q8TAI7 183 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 ABTB1Q969K4 478 aaPredicted RBP14.27□□□□□ -0.13
SRRT-209ENST00000474896 ADIPOR1Q96A54 375 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 SECISBP2Q96T21 854 aaKnown RBP14.27□□□□□ -0.13
SRRT-209ENST00000474896 SMR3AQ99954 134 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 ACTR8Q9H981 624 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 CALHM2Q9HA72 323 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 ZNF446Q9NWS9 450 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 SENP1Q9P0U3 644 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 C15orf41Q9Y2V0 281 aa14.27□□□□□ -0.13
SRRT-209ENST00000474896 ABCA2Q9BZC7 2435 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 MBD3L4A6NDZ8 208 aaPredicted RBP14.26□□□□□ -0.13
SRRT-209ENST00000474896 MBD3L3A6NE82 208 aaPredicted RBP14.26□□□□□ -0.13
SRRT-209ENST00000474896 MBD3L5A6NJ08 208 aaPredicted RBP14.26□□□□□ -0.13
SRRT-209ENST00000474896 H0YIV9 168 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 COPEO14579 308 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 GNB5O14775 395 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 GSTA1P08263 222 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 CT62P0C5K7 136 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 MTHFD2P13995 350 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 PIK3R1P27986 724 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 NEK2P51955 445 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 NAGLUP54802 743 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 NRG3P56975 720 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 RPP38P78345 283 aaKnown RBP14.26□□□□□ -0.13
SRRT-209ENST00000474896 FUT7Q11130 342 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 CUL3Q13618 768 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 CPSF6Q16630 551 aaKnown RBP eCLIP14.26□□□□□ -0.13
SRRT-209ENST00000474896 PFKFB4Q16877 469 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 DCST1Q5T197 706 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 BIVMQ86UB2 503 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 ZNF615Q8N8J6 731 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 MBD3L2Q8NHZ7 208 aaPredicted RBP14.26□□□□□ -0.13
SRRT-209ENST00000474896 REPS1Q96D71 796 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 YIPF4Q9BSR8 244 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 STMN4Q9H169 189 aaPredicted RBP14.26□□□□□ -0.13
SRRT-209ENST00000474896 OR10A5Q9H207 317 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 TMBIM4Q9HC24 238 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 NEUROD4Q9HD90 331 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 MKS1Q9NXB0 559 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 JKAMPQ9P055 326 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 TMEM216Q9P0N5 145 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 XPR1Q9UBH6 696 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 DCDC2Q9UHG0 476 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 MED12Q93074 2177 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 DOCK7Q96N67 2140 aa14.26□□□□□ -0.13
SRRT-209ENST00000474896 LRRC14BA6NHZ5 514 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 CLCA1A8K7I4 914 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 IL18BPO95998 194 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 ABCB1P08183 1280 aaPredicted RBP14.25□□□□□ -0.13
SRRT-209ENST00000474896 RBP1P09455 135 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 HOXC12P31275 282 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 CRHR1P34998 444 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 CCT5P48643 541 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 TMED10P49755 219 aaKnown RBP14.25□□□□□ -0.13
SRRT-209ENST00000474896 XKP51811 444 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 SORDQ00796 357 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 TIGD3Q6B0B8 471 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 YRDCQ86U90 279 aaKnown RBP14.25□□□□□ -0.13
SRRT-209ENST00000474896 EXOC3L1Q86VI1 746 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 GALNT12Q8IXK2 581 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 BANPQ8N9N5 519 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 C9orf106Q8NAJ2 232 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 OR4K14Q8NGD5 310 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 OR1J4Q8NGS1 313 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 TMEM41AQ96HV5 264 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 APOPT1Q96IL0 206 aa14.25□□□□□ -0.13
SRRT-209ENST00000474896 C18orf12Q96KH6 178 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms