RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 FIG4Q92562 907 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 PMM1Q92871 262 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 MMABQ96EY8 250 aaPredicted RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 PEX11GQ96HA9 241 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 SLC35G5Q96KT7 338 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 C7orf34Q96L11 122 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 MS4A4EQ96PG1 132 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 OR6C1Q96RD1 312 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 STACQ99469 402 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 PKP2Q99959 881 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 EFHD1Q9BUP0 239 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 RSPO3Q9BXY4 272 aaPredicted RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 ACTRT3Q9BYD9 372 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 SAP130Q9H0E3 1048 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 OR51I1Q9H343 314 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 PIGUQ9H490 435 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 IL1RAPQ9NPH3 570 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 MKKSQ9NPJ1 570 aaPredicted RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 NECTIN3Q9NQS3 549 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 PRTFDC1Q9NRG1 225 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 AGPAT4Q9NRZ5 378 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 OCIAD1Q9NX40 245 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 HCN3Q9P1Z3 774 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 DHCR7Q9UBM7 475 aaKnown RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 RPS6KA6Q9UK32 745 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 CNOT11Q9UKZ1 510 aaKnown RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 RARRES3Q9UL19 164 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 SAMD4AQ9UPU9 718 aaKnown RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 LIPT1Q9Y234 373 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 LRRC42Q9Y546 428 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 PCDHGA8Q9Y5G5 932 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 SNX8Q9Y5X2 465 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 ADAMTS20P59510 1910 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 ADAMTS9Q9P2N4 1935 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 DSPPQ9NZW4 1301 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 CROCCQ5TZA2 2017 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 A0A0G2JPF8 293 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 TCRBV16S1A1N1A0A5B0 115 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 DCDC2BA2VCK2 349 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 TTLL8A6PVC2 850 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 HNRNPCL2B2RXH8 293 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 HNRNPCL3B7ZW38 293 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 H0YJX3 145 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 GSTA4O15217 222 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 RFPL3O75679 317 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 SCRG1O75711 98 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 PRKD3O94806 890 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 NKX2-2O95096 273 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 MFN2O95140 757 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 PGM3O95394 542 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 SERPINA1P01009 418 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 IFNA14P01570 189 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 CLPSP04118 112 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 IGKV3-11P04433 115 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 CT62P0C5K7 136 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 HNRNPCL4P0DMR1 293 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 FBLP22087 321 aaKnown RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 CSTF2P33240 577 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 VHLP40337 213 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 OR1D4P47884 311 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 PPM1FP49593 454 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 PRIM2P49643 509 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 KHKP50053 298 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 ERFP50548 548 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 KCNJ10P78508 379 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 BTG2P78543 158 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 FUT5Q11128 374 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 DUSP8Q13202 625 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 GNA13Q14344 377 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 ATP6AP1Q15904 470 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 SPDYE7PQ495Y7 208 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 NKAIN1Q4KMZ8 207 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 FAM98BQ52LJ0 330 aaKnown RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 TRMT12Q53H54 448 aaKnown RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 CMPK2Q5EBM0 449 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 TBCELQ5QJ74 424 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 FAM111BQ6SJ93 734 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 ENPP6Q6UWR7 440 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 RBM44Q6ZP01 1051 aaKnown RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 LRRC74BQ6ZQY2 392 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 PRR23CQ6ZRP0 262 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 OVCH1Q7RTY7 1134 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 TSEN54Q7Z6J9 526 aaKnown RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 FAM86B1Q8N7N1 296 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 ZNF615Q8N8J6 731 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 CDRT4Q8N9R6 151 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 RCBTB1Q8NDN9 531 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 ADCY4Q8NFM4 1077 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 OR7G1Q8NGA0 311 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 NFKBIDQ8NI38 313 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 FAM110BQ8TC76 370 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 PTPMT1Q8WUK0 201 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-207ENST00000474825 LRTOMTQ8WZ04 291 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 KAT2AQ92830 837 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 MAL2Q969L2 176 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 NCLNQ969V3 563 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 FAM162AQ96A26 154 aa6.17□□□□□ -1.42
ATG4A-207ENST00000474825 FKBP10Q96AY3 582 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms