RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, human

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VARS-223	ENST00000474643	TLE4	Q04727	773 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	HEPACAM	Q14CZ8	416 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	CDSN	Q15517	529 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	KANK2	Q63ZY3	851 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	B3GNT6	Q6ZMB0	384 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	TRIM46	Q7Z4K8	759 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	TRIM42	Q8IWZ5	723 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	KIRREL3	Q8IZU9	778 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	SLC15A4	Q8N697	577 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	OR6Y1	Q8NGX8	325 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	TWIST2	Q8WVJ9	160 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	KLHL29	Q96CT2	875 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	SPOCK3	Q9BQ16	436 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	TRIM8	Q9BZR9	551 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	ZDHHC11	Q9H8X9	412 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	PNPLA3	Q9NST1	481 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	TUBA8	Q9NY65	449 aa	Predicted RBP	13.94	□□□□□ -0.18
VARS-223	ENST00000474643	CNIH4	Q9P003	139 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	RNF6	Q9Y252	685 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	DLGAP4	Q9Y2H0	992 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	POLR3H	Q9Y535	204 aa	Predicted RBP	13.94	□□□□□ -0.18
VARS-223	ENST00000474643	PCDHA9	Q9Y5H5	950 aa		13.94	□□□□□ -0.18
VARS-223	ENST00000474643	GTF3C1	Q12789	2109 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	TRGV5	A0A0B4J1U4	118 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	C2orf92	A0A1B0GVN3	265 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	TMEM114	B3SHH9	223 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	TMEM233	B4DJY2	109 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	FAM47E-STBD1	D6RA91	191 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	HRK	O00198	91 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	KLF11	O14901	512 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	SKAP2	O75563	359 aa	Predicted RBP	13.93	□□□□□ -0.18
VARS-223	ENST00000474643	IGKV3-11	P04433	115 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	GRK2	P25098	689 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	MASP1	P48740	699 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	RPP38	P78345	283 aa	Known RBP	13.93	□□□□□ -0.18
VARS-223	ENST00000474643	RAE1	P78406	368 aa	Known RBP	13.93	□□□□□ -0.18
VARS-223	ENST00000474643	ZNF763	Q0D2J5	394 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	SPRED3	Q2MJR0	410 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	GXYLT1	Q4G148	440 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	SLC48A1	Q6P1K1	146 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	GALNT12	Q8IXK2	581 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	C16orf78	Q8WTQ4	265 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	DOHH	Q9BU89	302 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	WWTR1	Q9GZV5	400 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	LRTM1	Q9HBL6	345 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	PLSCR2	Q9NRY7	297 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	GIMAP4	Q9NUV9	329 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	C1orf109	Q9NX04	203 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	FAM53C	Q9NYF3	392 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	TNFRSF10D	Q9UBN6	386 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	DNAJC15	Q9Y5T4	150 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	LIPG	Q9Y5X9	500 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	PTGDR2	Q9Y5Y4	395 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	APC	P25054	2843 aa		13.93	□□□□□ -0.18
VARS-223	ENST00000474643	NKX2-6	A6NCS4	301 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	PIP5K1B	O14986	540 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	LYPLA1	O75608	230 aa	Predicted RBP	13.92	□□□□□ -0.18
VARS-223	ENST00000474643	GLS	O94925	669 aa	Predicted RBP	13.92	□□□□□ -0.18
VARS-223	ENST00000474643	FGF4	P08620	206 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	SLC35E2	P0CK97	266 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	CPM	P14384	443 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	DRD2	P14416	443 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	POR	P16435	677 aa	Predicted RBP	13.92	□□□□□ -0.18
VARS-223	ENST00000474643	BGN	P21810	368 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	GDF1	P27539	372 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	FEN1	P39748	380 aa	Known RBP	13.92	□□□□□ -0.18
VARS-223	ENST00000474643	KIR3DL1	P43629	444 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	GSTM5	P46439	218 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	WDR4	P57081	412 aa	Known RBP	13.92	□□□□□ -0.18
VARS-223	ENST00000474643	NUP107	P57740	925 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	ABCE1	P61221	599 aa	Known RBP	13.92	□□□□□ -0.18
VARS-223	ENST00000474643	RPL38	P63173	70 aa	Known RBP	13.92	□□□□□ -0.18
VARS-223	ENST00000474643	C2orf80	Q0P641	193 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	STX3	Q13277	289 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	TOMM20	Q15388	145 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	GALNTL6	Q49A17	601 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	TMEM198	Q66K66	360 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	NOXRED1	Q6NXP6	359 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	TRIL	Q7L0X0	811 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	CCDC71	Q8IV32	467 aa	Predicted RBP	13.92	□□□□□ -0.18
VARS-223	ENST00000474643	MMP21	Q8N119	569 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	FBXW8	Q8N3Y1	598 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	OR10G3	Q8NGC4	313 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	FAM76A	Q8TAV0	307 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	DIO2	Q92813	273 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	ZNF597	Q96LX8	424 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	BRINP2	Q9C0B6	783 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	ZFP64	Q9NPA5	681 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	MIEF1	Q9NQG6	463 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	RYDEN	Q9NUL5	291 aa	Known RBP	13.92	□□□□□ -0.18
VARS-223	ENST00000474643	ZDHHC2	Q9UIJ5	367 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	UTS2R	Q9UKP6	389 aa		13.92	□□□□□ -0.18
VARS-223	ENST00000474643	NCOA6	Q14686	2063 aa	Predicted RBP	13.92	□□□□□ -0.18
VARS-223	ENST00000474643	PKDREJ	Q9NTG1	2253 aa		13.91	□□□□□ -0.18
VARS-223	ENST00000474643	AQP7	O14520	342 aa		13.91	□□□□□ -0.18
VARS-223	ENST00000474643	SUSD5	O60279	629 aa		13.91	□□□□□ -0.18
VARS-223	ENST00000474643	WDR1	O75083	606 aa		13.91	□□□□□ -0.18
VARS-223	ENST00000474643	LRAT	O95237	230 aa		13.91	□□□□□ -0.18
VARS-223	ENST00000474643	IGHG3	P01860	377 aa		13.91	□□□□□ -0.18
VARS-223	ENST00000474643	CSNK2A2	P19784	350 aa	Predicted RBP	13.91	□□□□□ -0.18

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