RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CEBPEQ15744 281 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 ZNF630Q2M218 657 aaPredicted RBP10.27□□□□□ -0.77
CKS1B-206ENST00000474215 ERCC6LQ2NKX8 1250 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 ZNF628Q5EBL2 1059 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 TMEM198Q66K66 360 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 TMEM211Q6ICI0 200 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 FAM71E1Q6IPT2 247 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 NCCRP1Q6ZVX7 275 aaPredicted RBP10.27□□□□□ -0.77
CKS1B-206ENST00000474215 NUP54Q7Z3B4 507 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 HOMEZQ8IX15 550 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 PRR22Q8IZ63 422 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 MREGQ8N565 214 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 SPPL2AQ8TCT8 520 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 KAT2AQ92830 837 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 JSRP1Q96MG2 331 aaPredicted RBP10.27□□□□□ -0.77
CKS1B-206ENST00000474215 FAM111AQ96PZ2 611 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 BBS4Q96RK4 519 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 SMC6Q96SB8 1091 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 ITPAQ9BY32 194 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 LDAHQ9H6V9 325 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 MYNNQ9NPC7 610 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 CHST11Q9NPF2 352 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 SLC17A7Q9P2U7 560 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 GPR55Q9Y2T6 319 aaPredicted RBP10.27□□□□□ -0.77
CKS1B-206ENST00000474215 LIPGQ9Y5X9 500 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 DIDO1Q9BTC0 2240 aaKnown RBP10.27□□□□□ -0.77
CKS1B-206ENST00000474215 MYO7BQ6PIF6 2116 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 TRGV5A0A0B4J1U4 118 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 MYO1GB0I1T2 1018 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 ESPNB1AK53 854 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 NPIPB8E9PQR5 432 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 AQP7O14520 342 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 TO15178 435 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 HNRNPRO43390 633 aaKnown RBP10.26□□□□□ -0.77
CKS1B-206ENST00000474215 RGS14O43566 566 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 NPHS1O60500 1241 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 PLOD3O60568 738 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 SPAG7O75391 227 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 PPM1BO75688 479 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 CLDN14O95500 239 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 CHEK2O96017 543 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 FGF4P08620 206 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 PRPH2P23942 346 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 GRNP28799 593 aaKnown RBP10.26□□□□□ -0.77
CKS1B-206ENST00000474215 CASP3P42574 277 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 KIAA0040Q15053 153 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 CDSNQ15517 529 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 NNATQ16517 81 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 PRSS53Q2L4Q9 553 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 ARL13AQ5H913 290 aaPredicted RBP10.26□□□□□ -0.77
CKS1B-206ENST00000474215 BICRALQ6AI39 1079 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 RNF165Q6ZSG1 346 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 IKBIPQ70UQ0 350 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 PACS2Q86VP3 889 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 TICAM1Q8IUC6 712 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 FAM9CQ8IZT9 166 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 OR5M9Q8NGP3 310 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 OR9A2Q8NGT5 310 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 CDC26Q8NHZ8 85 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 TCP10LQ8TDR4 215 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 ZNF597Q96LX8 424 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 RILPQ96NA2 401 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 ZNF703Q9H7S9 590 aaPredicted RBP10.26□□□□□ -0.77
CKS1B-206ENST00000474215 ANKRA2Q9H9E1 313 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 EML4Q9HC35 981 aaKnown RBP10.26□□□□□ -0.77
CKS1B-206ENST00000474215 ACKR4Q9NPB9 350 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 MIEF1Q9NQG6 463 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 PNPLA3Q9NST1 481 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 C1orf109Q9NX04 203 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 QPCTLQ9NXS2 382 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 B4GALT7Q9UBV7 327 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 ACAD8Q9UKU7 415 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 EXO1Q9UQ84 846 aaKnown RBP10.26□□□□□ -0.77
CKS1B-206ENST00000474215 TRAF6Q9Y4K3 522 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 POLR3HQ9Y535 204 aaPredicted RBP10.26□□□□□ -0.77
CKS1B-206ENST00000474215 DNAJC15Q9Y5T4 150 aa10.26□□□□□ -0.77
CKS1B-206ENST00000474215 ITPR2Q14571 2701 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 FRG2CA6NGY1 282 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 LINC00032P0C843 101 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 CREB1P16220 341 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 ACVR2AP27037 513 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 PLCXD2Q0VAA5 305 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 UGT3A2Q3SY77 523 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 KANK2Q63ZY3 851 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 ZNF585AQ6P3V2 769 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 Q6ZSR9 355 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 CLYBLQ8N0X4 340 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 MARVELD2Q8N4S9 558 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 OR7G2Q8NG99 324 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 CA5BP1Q8WTZ4 195 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 RND1Q92730 232 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 HGDQ93099 445 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 MARVELD3Q96A59 401 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 SARAFQ96BY9 339 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 SDCCAG3Q96C92 435 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 NTNG2Q96CW9 530 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 OMA1Q96E52 524 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 EGLN2Q96KS0 407 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 GNRHR2Q96P88 292 aa10.25□□□□□ -0.77
CKS1B-206ENST00000474215 BTBD9Q96Q07 612 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms