RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 OTUD4Q01804 1114 aaKnown RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 DMPKQ09013 629 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 CETN1Q12798 172 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 SNX1Q13596 522 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 CUL1Q13616 776 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 PTK6Q13882 451 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 DPYSL3Q14195 570 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 IRF3Q14653 427 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 GPNMBQ14956 572 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 EFTUD2Q15029 972 aaKnown RBP eCLIP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 TRIP13Q15645 432 aaPredicted RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 CDO1Q16878 200 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 C15orf59Q2T9L4 293 aaPredicted RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 CCDC14Q49A88 953 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 TNFAIP8L3Q5GJ75 292 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 RNASEH2BQ5TBB1 312 aaKnown RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 ANKRD22Q5VYY1 191 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 KCTD16Q68DU8 428 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 TTC19Q6DKK2 380 aaPredicted RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 PMF1Q6P1K2 205 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 NOTUMQ6P988 496 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 EMBQ6PCB8 327 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 CCDC137Q6PK04 289 aaKnown RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 LCLAT1Q6UWP7 414 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 FRRS1Q6ZNA5 592 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 CLEC20AQ6ZU45 233 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 PAQR9Q6ZVX9 377 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 CHST9Q7L1S5 443 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 CATSPER4Q7RTX7 472 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 BNIPLQ7Z465 357 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 GALNT5Q7Z7M9 940 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 ACOT1Q86TX2 421 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 SERINC5Q86VE9 423 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 TMEM173Q86WV6 379 aaPredicted RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 CCDC50Q8IVM0 306 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 CD302Q8IX05 232 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 IFT20Q8IY31 132 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 KATNAL2Q8IYT4 538 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 ADGRF2Q8IZF7 708 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 KIRREL3Q8IZU9 778 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 SYCE1Q8N0S2 351 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 IQCKQ8N0W5 287 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 TTC39CQ8N584 583 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 CPSF7Q8N684 471 aaKnown RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 ALLCQ8N6M5 410 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 PQLC3Q8N755 202 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 LRRC52Q8N7C0 313 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 UBL4BQ8N7F7 174 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 OR10T2Q8NGX3 314 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 EXD1Q8NHP7 514 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 UBA3Q8TBC4 463 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 FBXO25Q8TCJ0 367 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 CD99L2Q8TCZ2 262 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 SLC2A14Q8TDB8 520 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 RNF128Q8TEB7 428 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 TRPC4APQ8TEL6 797 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF721Q8TF20 911 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 IFT81Q8WYA0 676 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 NDRG1Q92597 394 aaKnown RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 PRCCQ92733 491 aaPredicted RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 TAF4BQ92750 862 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 MYLPFQ96A32 169 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 TLCD1Q96CP7 247 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 FAF2Q96CS3 445 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 MTERF3Q96E29 417 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF486Q96H40 463 aaPredicted RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 HPDLQ96IR7 371 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 FAM81BQ96LP2 452 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 OR2A14Q96R47 310 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 SLC22A12Q96S37 553 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 DDOQ99489 341 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 FMO2Q99518 471 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 PKMYT1Q99640 499 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 ERP44Q9BS26 406 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 RTBDNQ9BSG5 229 aaPredicted RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 MTG1Q9BT17 334 aaPredicted RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 TCHPQ9BT92 498 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 HGH1Q9BTY7 390 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 SNRNP25Q9BV90 132 aaKnown RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 GCOM2Q9BZD3 368 aaPredicted RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 OSBPL8Q9BZF1 889 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 SLC39A8Q9C0K1 460 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 GHITMQ9H3K2 345 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 RABEP2Q9H5N1 569 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 ASB7Q9H672 318 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 LRRC19Q9H756 370 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 RPF1Q9H9Y2 349 aaKnown RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 TMBIM4Q9HC24 238 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 HHATLQ9HCP6 504 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 EIF2B3Q9NR50 452 aaKnown RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 ETNK2Q9NVF9 386 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 DNAJC17Q9NVM6 304 aaKnown RBP1.31□□□□□ -2.2
CCDC39-203ENST00000473854 GPATCH2LQ9NWQ4 482 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 MARCH5Q9NX47 278 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 DPP3Q9NY33 737 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 NINJ2Q9NZG7 142 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 RNF14Q9UBS8 474 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 PCYOX1Q9UHG3 505 aa1.31□□□□□ -2.2
CCDC39-203ENST00000473854 SLC12A6Q9UHW9 1150 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms