RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 GFM2Q969S9 779 aaKnown RBP10.61□□□□□ -0.71
CPNE1-222ENST00000473373 ZBTB9Q96C00 473 aa10.61□□□□□ -0.71
CPNE1-222ENST00000473373 LCORQ96JN0 433 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-222ENST00000473373 ITPAQ9BY32 194 aa10.61□□□□□ -0.71
CPNE1-222ENST00000473373 NXF5Q9H1B4 397 aaKnown RBP10.61□□□□□ -0.71
CPNE1-222ENST00000473373 TP63Q9H3D4 680 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-222ENST00000473373 KCNK9Q9NPC2 374 aa10.61□□□□□ -0.71
CPNE1-222ENST00000473373 C1orf109Q9NX04 203 aa10.61□□□□□ -0.71
CPNE1-222ENST00000473373 MKS1Q9NXB0 559 aa10.61□□□□□ -0.71
CPNE1-222ENST00000473373 TAS2R9Q9NYW1 312 aa10.61□□□□□ -0.71
CPNE1-222ENST00000473373 EHD3Q9NZN3 535 aa10.61□□□□□ -0.71
CPNE1-222ENST00000473373 LGALS13Q9UHV8 139 aa10.61□□□□□ -0.71
CPNE1-222ENST00000473373 CES1P1Q9UKY3 287 aa10.61□□□□□ -0.71
CPNE1-222ENST00000473373 MEMO1Q9Y316 297 aa10.61□□□□□ -0.71
CPNE1-222ENST00000473373 TRGV5A0A0B4J1U4 118 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 SERTM1A2A2V5 107 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 WDR91A4D1P6 747 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 FIGNL2A6NMB9 653 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 CTIFO43310 598 aaKnown RBP10.6□□□□□ -0.71
CPNE1-222ENST00000473373 AKAP10O43572 662 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 NPHS1O60500 1241 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 COQ9O75208 318 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 ERLIN1O75477 346 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 SKAP2O75563 359 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-222ENST00000473373 REM1O75628 298 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 HSPA4LO95757 839 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 TUBBP07437 444 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 DDX5P17844 614 aaKnown RBP10.6□□□□□ -0.71
CPNE1-222ENST00000473373 POU3F2P20265 443 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-222ENST00000473373 DDCP20711 480 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 ABCD3P28288 659 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 GCKP35557 465 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 TRPC1P48995 793 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 DCAF7P61962 342 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 ZNHIT3Q15649 155 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-222ENST00000473373 CEP85LQ5SZL2 805 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 NOXRED1Q6NXP6 359 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 Q6ZPB1 254 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-222ENST00000473373 CROCCP2Q86T23 111 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 DOLPP1Q86YN1 238 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 NUDCD3Q8IVD9 361 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 ZNF615Q8N8J6 731 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 ZFP28Q8NHY6 868 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 FAM76AQ8TAV0 307 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 TWIST2Q8WVJ9 160 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 ITLN2Q8WWU7 325 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-222ENST00000473373 SARAFQ96BY9 339 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 SDCCAG3Q96C92 435 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 OMA1Q96E52 524 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 DTNBP1Q96EV8 351 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 HSPBAP1Q96EW2 488 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 RILPQ96NA2 401 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 PAIP2Q9BPZ3 127 aaKnown RBP10.6□□□□□ -0.71
CPNE1-222ENST00000473373 ANKRA2Q9H9E1 313 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 ZFP64Q9NPA5 681 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 MYNNQ9NPC7 610 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 DDX18Q9NVP1 670 aaKnown RBP10.6□□□□□ -0.71
CPNE1-222ENST00000473373 SH3BP4Q9P0V3 963 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 ZNF835Q9Y2P0 537 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 PTGDR2Q9Y5Y4 395 aa10.6□□□□□ -0.71
CPNE1-222ENST00000473373 NUP214P35658 2090 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-222ENST00000473373 C15orf38-AP3S2A0A0A6YYH1 394 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 TMEM114B3SHH9 223 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 E9PLN8 166 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 GNB5O14775 395 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 BCKDKO14874 412 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 ACOX3O15254 700 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 PDPK1O15530 556 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 ERN1O75460 977 aaKnown RBP10.59□□□□□ -0.71
CPNE1-222ENST00000473373 PPM1BO75688 479 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 CLPSP04118 112 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 CHRNGP07510 517 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 SNRPB2P08579 225 aaKnown RBP10.59□□□□□ -0.71
CPNE1-222ENST00000473373 MAPK1P28482 360 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 HTR1EP28566 365 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 RFX3P48380 749 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 DUSP2Q05923 314 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 HSPB3Q12988 150 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 ATP6AP1LQ52LC2 224 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 ARL13AQ5H913 290 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-222ENST00000473373 GALNT18Q6P9A2 607 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 TMEM107Q6UX40 140 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 NCCRP1Q6ZVX7 275 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-222ENST00000473373 IKBIPQ70UQ0 350 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 TRIM46Q7Z4K8 759 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 CLYBLQ8N0X4 340 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 SLC34A3Q8N130 599 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 C17orf47Q8NEP4 570 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 CLHC1Q8NHS4 586 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 SPPL2AQ8TCT8 520 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 ZNF675Q8TD23 568 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 ADIPOR1Q96A54 375 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 PPCDCQ96CD2 204 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 TMCO6Q96DC7 493 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 CHMP6Q96FZ7 201 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 TSSK3Q96PN8 268 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 VKORC1Q9BQB6 163 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 OSBPL11Q9BXB4 747 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 TNFRSF10DQ9UBN6 386 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 DTX4Q9Y2E6 619 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms