RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 MZB1Q8WU39 189 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 NUDT8Q8WV74 236 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 SELENOMQ8WWX9 145 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 CTHRC1Q96CG8 243 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 SH3GL2Q99962 352 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 MRPL57Q9BQC6 102 aaKnown RBP7.37□□□□□ -1.23
USP48-207ENST00000471752 EBPLQ9BY08 206 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 TXLNGYQ9BZA5 131 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 ACPTQ9BZG2 426 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 SHCBP1LQ9BZQ2 653 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 MRPL46Q9H2W6 279 aaKnown RBP7.37□□□□□ -1.23
USP48-207ENST00000471752 CNIH4Q9P003 139 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 BCAP29Q9UHQ4 241 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 FBXL2Q9UKC9 423 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 MAPRE3Q9UPY8 281 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 EXO1Q9UQ84 846 aaKnown RBP7.37□□□□□ -1.23
USP48-207ENST00000471752 C15orf41Q9Y2V0 281 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 PTGDR2Q9Y5Y4 395 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 PHF3Q92576 2039 aaKnown RBP7.37□□□□□ -1.23
USP48-207ENST00000471752 ANKRD33BA6NCL7 494 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 OR6C76A6NM76 312 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 G3V2L1 256 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 H0YC42 278 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 SYT5O00445 386 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 SMIM24O75264 130 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 CTAG2O75638 210 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 PPM1BO75688 479 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 SUPT7LO94864 414 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 SEMA3DO95025 777 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 EPPINO95925 133 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 SHBGP04278 402 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 SNRPAP09012 282 aaKnown RBP7.36□□□□□ -1.23
USP48-207ENST00000471752 CT45A8P0DMV1 189 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 CT45A9P0DMV2 189 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 UQCRC1P31930 480 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 GALNSP34059 522 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 PHBP35232 272 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 ARFIP1P53367 373 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 TPD52P55327 224 aaPredicted RBP7.36□□□□□ -1.23
USP48-207ENST00000471752 CLDN15P56746 228 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 SRYQ05066 204 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 MYBPHQ13203 477 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 BIKQ13323 160 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 WHAMMP3Q1A5X7 153 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 GGTA1PQ4G0N0 100 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 CT45A2Q5DJT8 189 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 ZNF628Q5EBL2 1059 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 WLSQ5T9L3 541 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 RIPPLY2Q5TAB7 128 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 TMEM198Q66K66 360 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 TIGD3Q6B0B8 471 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 KLC3Q6P597 504 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 ARSKQ6UWY0 536 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 ANGPTL8Q6UXH0 198 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 TAGAPQ8N103 731 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 FAM83FQ8NEG4 500 aaPredicted RBP7.36□□□□□ -1.23
USP48-207ENST00000471752 OR7G2Q8NG99 324 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 OR5M1Q8NGP8 315 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 OR9A2Q8NGT5 310 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 C16orf78Q8WTQ4 265 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 ANP32BQ92688 251 aaKnown RBP7.36□□□□□ -1.23
USP48-207ENST00000471752 TMBIM1Q969X1 311 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 TP53INP1Q96A56 240 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 EXOSC8Q96B26 276 aaKnown RBP7.36□□□□□ -1.23
USP48-207ENST00000471752 SARAFQ96BY9 339 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 KLHL29Q96CT2 875 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 REPS1Q96D71 796 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 OMA1Q96E52 524 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 FMO2Q99518 471 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 KLHDC3Q9BQ90 382 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 TUBA1CQ9BQE3 449 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 ZNF559Q9BR84 538 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 GPATCH1Q9BRR8 931 aaKnown RBP7.36□□□□□ -1.23
USP48-207ENST00000471752 CENPKQ9BS16 269 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 C1QTNF3Q9BXJ4 246 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 ELOVL6Q9H5J4 265 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 CCM2LQ9NUG4 571 aaPredicted RBP7.36□□□□□ -1.23
USP48-207ENST00000471752 TBK1Q9UHD2 729 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 TRPS1Q9UHF7 1281 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 ADAM29Q9UKF5 820 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 BOKQ9UMX3 212 aaPredicted RBP7.36□□□□□ -1.23
USP48-207ENST00000471752 CAMK2AQ9UQM7 478 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 DLGAP4Q9Y2H0 992 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 GPR55Q9Y2T6 319 aaPredicted RBP7.36□□□□□ -1.23
USP48-207ENST00000471752 WIF1Q9Y5W5 379 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 ROS1P08922 2347 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 JMJD1CQ15652 2540 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 TLN2Q9Y4G6 2542 aa7.36□□□□□ -1.23
USP48-207ENST00000471752 FAM221AA4D161 298 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 FIGNL2A6NMB9 653 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 TP53I11O14683 189 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 RIPK2O43353 540 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 ZIC3O60481 467 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 WDR1O75083 606 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 ATP1B1P05026 303 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 RHOXF2BP0C7M4 288 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 COL6A2P12110 1019 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 IMPDH1P20839 514 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 DEKP35659 375 aaKnown RBP7.35□□□□□ -1.23
USP48-207ENST00000471752 SERPINB9P50453 376 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms