RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 SPRR3Q9UBC9 169 aa17.27■□□□□ 0.36
COMMD1-207ENST00000471704 UTS2RQ9UKP6 389 aa17.27■□□□□ 0.36
COMMD1-207ENST00000471704 PLLPQ9Y342 182 aa17.27■□□□□ 0.36
COMMD1-207ENST00000471704 FIGNL2A6NMB9 653 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 FAM90A27PA6NNH2 459 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 COPEO14579 308 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 HCN1O60741 890 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 CDH16O75309 829 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 TRIM3O75382 744 aaPredicted RBP17.26■□□□□ 0.35
COMMD1-207ENST00000471704 PCSK2P16519 638 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 CCT5P48643 541 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 EMDP50402 254 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 KCNJ2P63252 427 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 ACSM2AQ08AH3 577 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 PCLAFQ15004 111 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 RPS6KA2Q15349 733 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 TESK1Q15569 626 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 ZNF628Q5EBL2 1059 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 FNDC7Q5VTL7 733 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 ACSM2BQ68CK6 577 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 DMRTC2Q8IXT2 367 aaPredicted RBP17.26■□□□□ 0.35
COMMD1-207ENST00000471704 SPPL2AQ8TCT8 520 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 SHCBP1LQ9BZQ2 653 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 ZFP64Q9NPA5 681 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 MED13LQ71F56 2210 aa17.26■□□□□ 0.35
COMMD1-207ENST00000471704 GNG14A0A1W2PPG7 69 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 NME6O75414 186 aaPredicted RBP17.25■□□□□ 0.35
COMMD1-207ENST00000471704 HOXD4P09016 255 aaPredicted RBP17.25■□□□□ 0.35
COMMD1-207ENST00000471704 CPA3P15088 417 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 ABCD3P28288 659 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 MAN2A2P49641 1150 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 CEBPEQ15744 281 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 C6orf163Q5TEZ5 329 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 HLA-DQA1Q5Y7H0 255 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 ZNF585AQ6P3V2 769 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 B3GNT6Q6ZMB0 384 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 CCDC116Q8IYX3 515 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 OR52R1Q8NGF1 315 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 RDH11Q8TC12 318 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 DIO2Q92813 273 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 EXOSC8Q96B26 276 aaKnown RBP17.25■□□□□ 0.35
COMMD1-207ENST00000471704 SARAFQ96BY9 339 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 BCAP29Q9UHQ4 241 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 ACAD8Q9UKU7 415 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 PSME2Q9UL46 239 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 BOKQ9UMX3 212 aaPredicted RBP17.25■□□□□ 0.35
COMMD1-207ENST00000471704 EXO1Q9UQ84 846 aaKnown RBP17.25■□□□□ 0.35
COMMD1-207ENST00000471704 CCL27Q9Y4X3 112 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 PTGDR2Q9Y5Y4 395 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 ZNF780BQ9Y6R6 833 aa17.25■□□□□ 0.35
COMMD1-207ENST00000471704 TRGV5A0A0B4J1U4 118 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 ANKRD33BA6NCL7 494 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 WDR1O75083 606 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 NUDT17P0C025 328 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 DRD2P14416 443 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 LIPMQ5VYY2 423 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 CLEC6AQ6EIG7 209 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 TRIM46Q7Z4K8 759 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 C10orf107Q8IVU9 208 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 OR9A2Q8NGT5 310 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.24■□□□□ 0.35
COMMD1-207ENST00000471704 ZNF675Q8TD23 568 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 AENQ8WTP8 325 aaKnown RBP17.24■□□□□ 0.35
COMMD1-207ENST00000471704 HGDQ93099 445 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 DOHHQ9BU89 302 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 ANGPTL4Q9BY76 406 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 SLC6A15Q9H2J7 730 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 ACKR4Q9NPB9 350 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 MKS1Q9NXB0 559 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 QPCTLQ9NXS2 382 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 KIAA1549Q9HCM3 1950 aa17.24■□□□□ 0.35
COMMD1-207ENST00000471704 A0A0G2JNJ9 132 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 TLDC2A0PJX2 215 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 ABCB1P08183 1280 aaPredicted RBP17.23■□□□□ 0.35
COMMD1-207ENST00000471704 ANXA4P09525 319 aaPredicted RBP17.23■□□□□ 0.35
COMMD1-207ENST00000471704 ADH7P40394 386 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 PTGDSP41222 190 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 CASP3P42574 277 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 ZFP36L2P47974 494 aaKnown RBP17.23■□□□□ 0.35
COMMD1-207ENST00000471704 CDH24Q86UP0 819 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 TRABD2AQ86V40 505 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 BANPQ8N9N5 519 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 CCDC63Q8NA47 563 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 KAT2AQ92830 837 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 LCORQ96JN0 433 aaPredicted RBP17.23■□□□□ 0.35
COMMD1-207ENST00000471704 ZNF597Q96LX8 424 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 JSRP1Q96MG2 331 aaPredicted RBP17.23■□□□□ 0.35
COMMD1-207ENST00000471704 RILPQ96NA2 401 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 NODALQ96S42 347 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 SECISBP2Q96T21 854 aaKnown RBP17.23■□□□□ 0.35
COMMD1-207ENST00000471704 GATA5Q9BWX5 397 aaPredicted RBP17.23■□□□□ 0.35
COMMD1-207ENST00000471704 LDAHQ9H6V9 325 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 Q9UFV3 132 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 ITGB1BP2Q9UKP3 347 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 POLR3HQ9Y535 204 aaPredicted RBP17.23■□□□□ 0.35
COMMD1-207ENST00000471704 PCDHGB3Q9Y5G1 929 aa17.23■□□□□ 0.35
COMMD1-207ENST00000471704 C2CD3Q4AC94 2353 aa17.22■□□□□ 0.35
COMMD1-207ENST00000471704 SETD2Q9BYW2 2564 aaPredicted RBP17.22■□□□□ 0.35
COMMD1-207ENST00000471704 CCDC151A5D8V7 595 aa17.22■□□□□ 0.35
COMMD1-207ENST00000471704 CAPN14A8MX76 684 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms