RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 LINC00518Q8N0U6 118 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 Q8N9L7 120 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 NFAM1Q8NET5 270 aaPredicted RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 FNDC8Q8TC99 324 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 UBTD2Q8WUN7 234 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 RNF138Q8WVD3 245 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 SNRNP27Q8WVK2 155 aaKnown RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 TFB1MQ8WVM0 346 aaKnown RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 FAM46BQ96A09 425 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 MRPL53Q96EL3 112 aaKnown RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 PLEKHF1Q96S99 279 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 JPH2Q9BR39 696 aaPredicted RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 DPH7Q9BTV6 452 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 FUNDC2Q9BWH2 189 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 HCAR1Q9BXC0 346 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 ELOVL4Q9GZR5 314 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 OPN3Q9H1Y3 402 aaPredicted RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 SLC26A1Q9H2B4 701 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 DCLRE1BQ9H816 532 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF702PQ9H963 129 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 KCNMB3Q9NPA1 279 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 NRN1Q9NPD7 142 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 HPS4Q9NQG7 708 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 TUBGCP4Q9UGJ1 667 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 PDE10AQ9Y233 779 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 MEGF6O75095 1541 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 SCN2AQ99250 2005 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 FGD5Q6ZNL6 1462 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 A0A0A6YYC8 382 aaPredicted RBP0.89□□□□□ -2.27
UBXN4-207ENST00000471246 A4D1N5 150 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP0.89□□□□□ -2.27
UBXN4-207ENST00000471246 I3L1I5 382 aaPredicted RBP0.89□□□□□ -2.27
UBXN4-207ENST00000471246 TIMM44O43615 452 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 LCMT2O60294 686 aaKnown RBP0.89□□□□□ -2.27
UBXN4-207ENST00000471246 RTN2O75298 545 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 REC8O95072 547 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 PGK1P00558 417 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 PSG2P11465 335 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 UGT1A6P19224 532 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 FUT3P21217 361 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 STIP1P31948 543 aaKnown RBP0.89□□□□□ -2.27
UBXN4-207ENST00000471246 SAA4P35542 130 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 CAV2P51636 162 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 BFSP1Q12934 665 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 HERPUD1Q15011 391 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 EXOSC7Q15024 291 aaKnown RBP0.89□□□□□ -2.27
UBXN4-207ENST00000471246 ZIC1Q15915 447 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 IL17AQ16552 155 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 STX1AQ16623 288 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 KYAT1Q16773 422 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 HKDC1Q2TB90 917 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 KBTBD12Q3ZCT8 623 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 CCDC14Q49A88 953 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 EPC2Q52LR7 807 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 SBK1Q52WX2 424 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF789Q5FWF6 425 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 TFDP3Q5H9I0 405 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 SPATA46Q5T0L3 261 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 PRAMEF8Q5VWM4 474 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 KCTD11Q693B1 232 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 ATRAIDQ6UW56 229 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 GBP6Q6ZN66 633 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 SLC22A16Q86VW1 577 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 ERI1Q8IV48 349 aaKnown RBP0.89□□□□□ -2.27
UBXN4-207ENST00000471246 STHQ8IWL8 128 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 MKXQ8IYA7 352 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 MCOLN2Q8IZK6 566 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 CLYBLQ8N0X4 340 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 CADM2Q8N3J6 435 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 LHX4Q969G2 390 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 RPGRIP1Q96KN7 1286 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 CPXM1Q96SM3 734 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 CACNG6Q9BXT2 260 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF350Q9GZX5 532 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 TSPY26PQ9H489 355 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 DCTPP1Q9H773 170 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF331Q9NQX6 463 aaPredicted RBP0.89□□□□□ -2.27
UBXN4-207ENST00000471246 PNPLA3Q9NST1 481 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 DDX28Q9NUL7 540 aaKnown RBP0.89□□□□□ -2.27
UBXN4-207ENST00000471246 ACOXLQ9NUZ1 547 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 KLK12Q9UKR0 248 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 NEU3Q9UQ49 428 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 RPH3AQ9Y2J0 694 aaPredicted RBP0.89□□□□□ -2.27
UBXN4-207ENST00000471246 KIF7Q2M1P5 1343 aa0.89□□□□□ -2.27
UBXN4-207ENST00000471246 ARHGAP23Q9P227 1491 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 NPIPA5A0A0B4J1W7 369 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 HMGB1P1B2RPK0 211 aaPredicted RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 NPIPA5E9PKD4 350 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 WWP2O00308 870 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 STX6O43752 255 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 TYROBPO43914 113 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 RANBP6O60518 1105 aaKnown RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 GMNNO75496 209 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 GPX5O75715 221 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 SFTPBP07988 381 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 SERPINF2P08697 491 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 ALOX5P09917 674 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 GHRP10912 638 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 CYP3A5P20815 502 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 PTBP1P26599 531 aaKnown RBP eCLIP0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms