RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 FAM71E1Q6IPT2 247 aa12.91□□□□□ -0.34
COMMD3-208ENST00000470045 TMEM81Q6P7N7 255 aa12.91□□□□□ -0.34
COMMD3-208ENST00000470045 OR52R1Q8NGF1 315 aa12.91□□□□□ -0.34
COMMD3-208ENST00000470045 DIO2Q92813 273 aa12.91□□□□□ -0.34
COMMD3-208ENST00000470045 HSPBAP1Q96EW2 488 aa12.91□□□□□ -0.34
COMMD3-208ENST00000470045 SMC6Q96SB8 1091 aa12.91□□□□□ -0.34
COMMD3-208ENST00000470045 DOHHQ9BU89 302 aa12.91□□□□□ -0.34
COMMD3-208ENST00000470045 TMEM109Q9BVC6 243 aa12.91□□□□□ -0.34
COMMD3-208ENST00000470045 ANGPTL4Q9BY76 406 aa12.91□□□□□ -0.34
COMMD3-208ENST00000470045 RRAGDQ9NQL2 400 aaPredicted RBP12.91□□□□□ -0.34
COMMD3-208ENST00000470045 SLC35C2Q9NQQ7 365 aa12.91□□□□□ -0.34
COMMD3-208ENST00000470045 TAS2R7Q9NYW3 318 aa12.91□□□□□ -0.34
COMMD3-208ENST00000470045 BCAP29Q9UHQ4 241 aa12.91□□□□□ -0.34
COMMD3-208ENST00000470045 WBP11Q9Y2W2 641 aaKnown RBP12.91□□□□□ -0.34
COMMD3-208ENST00000470045 NOTCH2Q04721 2471 aa12.91□□□□□ -0.34
COMMD3-208ENST00000470045 ATP6AP2A0A1C7CYW4 349 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 BCKDKO14874 412 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 TO15178 435 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 ACOX3O15254 700 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 HNRNPRO43390 633 aaKnown RBP12.9□□□□□ -0.34
COMMD3-208ENST00000470045 PLOD3O60568 738 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 CRCPO75575 148 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 PPM1BO75688 479 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 ATP6AP2O75787 350 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 LRATO95237 230 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 CLDN14O95500 239 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 ABCB1P08183 1280 aaPredicted RBP12.9□□□□□ -0.34
COMMD3-208ENST00000470045 ENDOUP21128 410 aaKnown RBP12.9□□□□□ -0.34
COMMD3-208ENST00000470045 DRD5P21918 477 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 HTR1EP28566 365 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 PPICP45877 212 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 DCAF7P61962 342 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 IFFO1Q0D2I5 559 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 SLC10A1Q14973 349 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 PRSS53Q2L4Q9 553 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 FNDC7Q5VTL7 733 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 KANK2Q63ZY3 851 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 CLEC6AQ6EIG7 209 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 IKBIPQ70UQ0 350 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 TICAM1Q8IUC6 712 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 SRRM1Q8IYB3 904 aaKnown RBP12.9□□□□□ -0.34
COMMD3-208ENST00000470045 CCDC116Q8IYX3 515 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 PRR22Q8IZ63 422 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 OR5M3Q8NGP4 307 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 OR9A2Q8NGT5 310 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 HGDQ93099 445 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 EXOSC8Q96B26 276 aaKnown RBP12.9□□□□□ -0.34
COMMD3-208ENST00000470045 LCORQ96JN0 433 aaPredicted RBP12.9□□□□□ -0.34
COMMD3-208ENST00000470045 FCRL1Q96LA6 429 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 ZNF597Q96LX8 424 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 FAM111AQ96PZ2 611 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 BTBD9Q96Q07 612 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 IQCGQ9H095 443 aaKnown RBP12.9□□□□□ -0.34
COMMD3-208ENST00000470045 ACKR4Q9NPB9 350 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 GIMAP4Q9NUV9 329 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 SLC17A7Q9P2U7 560 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 PRODH2Q9UF12 536 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 EXO1Q9UQ84 846 aaKnown RBP12.9□□□□□ -0.34
COMMD3-208ENST00000470045 ARHGAP21Q5T5U3 1957 aa12.9□□□□□ -0.34
COMMD3-208ENST00000470045 TRGV5A0A0B4J1U4 118 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 FRG2CA6NGY1 282 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 MYO1GB0I1T2 1018 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 NPIPA2E9PIF3 369 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 NPIPA3F8WFD2 350 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 AZIN1O14977 448 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 NPHS1O60500 1241 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 BCAS2O75934 225 aaPredicted RBP12.89□□□□□ -0.35
COMMD3-208ENST00000470045 SNX4O95219 450 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 ALDH3A1P30838 453 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 CASP3P42574 277 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 MAN2A2P49641 1150 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 RPP38P78345 283 aaKnown RBP12.89□□□□□ -0.35
COMMD3-208ENST00000470045 NNATQ16517 81 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 GXYLT1Q4G148 440 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 BICRALQ6AI39 1079 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 NOXRED1Q6NXP6 359 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 Q6ZSR9 355 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 HOMEZQ8IX15 550 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 FAM9CQ8IZT9 166 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 RPRMLQ8N4K4 120 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 OR2T11Q8NH01 316 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 OMA1Q96E52 524 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 ZNF764Q96H86 408 aaPredicted RBP12.89□□□□□ -0.35
COMMD3-208ENST00000470045 VSTM2LQ96N03 204 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 RILPQ96NA2 401 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 UBQLN3Q9H347 655 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 TUBB1Q9H4B7 451 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 ANKRA2Q9H9E1 313 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 CHST11Q9NPF2 352 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 PFDN4Q9NQP4 134 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 PNPLA3Q9NST1 481 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 B4GALT7Q9UBV7 327 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.89□□□□□ -0.35
COMMD3-208ENST00000470045 GPR55Q9Y2T6 319 aaPredicted RBP12.89□□□□□ -0.35
COMMD3-208ENST00000470045 POLR3HQ9Y535 204 aaPredicted RBP12.89□□□□□ -0.35
COMMD3-208ENST00000470045 PTGDR2Q9Y5Y4 395 aa12.89□□□□□ -0.35
COMMD3-208ENST00000470045 V9GYY5 206 aaPredicted RBP12.89□□□□□ -0.35
COMMD3-208ENST00000470045 HCFC1P51610 2035 aa12.88□□□□□ -0.35
COMMD3-208ENST00000470045 SLC28A1O00337 649 aa12.88□□□□□ -0.35
COMMD3-208ENST00000470045 SLITRK5O94991 958 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms