RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ZIK1Q3SY52 487 aaPredicted RBP16.96■□□□□ 0.31
SMC4-211ENST00000469858 UGT2A3Q6UWM9 527 aa16.96■□□□□ 0.31
SMC4-211ENST00000469858 DGAT2L6Q6ZPD8 337 aa16.96■□□□□ 0.31
SMC4-211ENST00000469858 PROX1Q92786 737 aa16.96■□□□□ 0.31
SMC4-211ENST00000469858 CDS1Q92903 461 aa16.96■□□□□ 0.31
SMC4-211ENST00000469858 SLC35A4Q96G79 324 aa16.96■□□□□ 0.31
SMC4-211ENST00000469858 ZNF300Q96RE9 604 aaPredicted RBP16.96■□□□□ 0.31
SMC4-211ENST00000469858 BARD1Q99728 777 aaKnown RBP16.96■□□□□ 0.31
SMC4-211ENST00000469858 NDC1Q9BTX1 674 aa16.96■□□□□ 0.31
SMC4-211ENST00000469858 YIPF2Q9BWQ6 316 aa16.96■□□□□ 0.31
SMC4-211ENST00000469858 RSPO3Q9BXY4 272 aaPredicted RBP16.96■□□□□ 0.31
SMC4-211ENST00000469858 SOX17Q9H6I2 414 aaPredicted RBP16.96■□□□□ 0.31
SMC4-211ENST00000469858 BCL2L10Q9HD36 194 aa16.96■□□□□ 0.31
SMC4-211ENST00000469858 SERTAD3Q9UJW9 196 aa16.96■□□□□ 0.31
SMC4-211ENST00000469858 TESMINQ9Y4I5 508 aa16.96■□□□□ 0.31
SMC4-211ENST00000469858 A0A0C4DFX4 3053 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 DUXAA6NLW8 204 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 TOX3O15405 576 aaPredicted RBP16.95■□□□□ 0.3
SMC4-211ENST00000469858 JRKO75564 520 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 RECKO95980 971 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 MSL3P1P0C860 447 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 THRBP10828 461 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 ITGA2P17301 1181 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 FPR1P21462 350 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 MGAT2Q10469 447 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 SQSTM1Q13501 440 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 ISLR2Q6UXK2 745 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 CARM1Q86X55 608 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 VWA5B2Q8N398 1253 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 DHRSXQ8N5I4 330 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 RCBTB1Q8NDN9 531 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 IFI44Q8TCB0 444 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.95■□□□□ 0.3
SMC4-211ENST00000469858 RASSF5Q8WWW0 418 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 ZNF501Q96CX3 271 aaPredicted RBP16.95■□□□□ 0.3
SMC4-211ENST00000469858 ANKRD60Q9BZ19 345 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 AMBRA1Q9C0C7 1298 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 LRRN3Q9H3W5 708 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 FANCEQ9HB96 536 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 EXD2Q9NVH0 621 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 GIN1Q9NXP7 522 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 USE1Q9NZ43 259 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 LIPT1Q9Y234 373 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 DMDP11532 3685 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 J3KTA2 159 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 HS6ST1O60243 411 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 ALBP02768 609 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 IFNW1P05000 195 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 ACP2P11117 423 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 MAOAP21397 527 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 MPLP40238 635 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 KCNJ5P48544 419 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 CHN2P52757 468 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 PUM1Q14671 1186 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMC4-211ENST00000469858 DUSP5Q16690 384 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 SLC36A3Q495N2 470 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 TCEAL6Q6IPX3 200 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 ST13P4Q8IZP2 240 aaPredicted RBP16.95■□□□□ 0.3
SMC4-211ENST00000469858 TCEAL3Q969E4 200 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 CTHRC1Q96CG8 243 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 MVB12AQ96EY5 273 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 RBM18Q96H35 190 aaKnown RBP16.95■□□□□ 0.3
SMC4-211ENST00000469858 ZNF347Q96SE7 839 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 ALOXE3Q9BYJ1 711 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 QRSL1Q9H0R6 528 aaKnown RBP16.95■□□□□ 0.3
SMC4-211ENST00000469858 ARRDC1-AS1Q9H2J1 176 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 ENAMQ9NRM1 1142 aa16.95■□□□□ 0.3
SMC4-211ENST00000469858 A0A0G2JPF8 293 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 HNRNPCL2B2RXH8 293 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 HNRNPCL3B7ZW38 293 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 ADAMDEC1O15204 470 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 DPM1O60762 260 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 GNAO1P09471 354 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 HNRNPCL4P0DMR1 293 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 ETS2P15036 469 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 HPCAP84074 193 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 SPIBQ01892 262 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 KCNC4Q03721 635 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 GALNT12Q8IXK2 581 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 OR4D9Q8NGE8 314 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 RNF31Q96EP0 1072 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 FBXL20Q96IG2 436 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 TRNT1Q96Q11 434 aaKnown RBP16.94■□□□□ 0.3
SMC4-211ENST00000469858 SPATA5L1Q9BVQ7 753 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 BTBD2Q9BX70 525 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 SLC38A1Q9H2H9 487 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 CXorf21Q9HAI6 301 aa16.94■□□□□ 0.3
SMC4-211ENST00000469858 PDP1Q9P0J1 537 aaPredicted RBP16.94■□□□□ 0.3
SMC4-211ENST00000469858 FAM32AQ9Y421 112 aaKnown RBP16.94■□□□□ 0.3
SMC4-211ENST00000469858 FER1L5A0AVI2 2057 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 CLIC3O95833 236 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 AGR2O95994 175 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 CKMT1AP12532 417 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 CAPGP40121 348 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 PDX1P52945 283 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 IGLV3-21P80748 117 aaPredicted RBP16.93■□□□□ 0.3
SMC4-211ENST00000469858 CHRNEQ04844 493 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 BLMHQ13867 455 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 PRAMEF8Q5VWM4 474 aa16.93■□□□□ 0.3
SMC4-211ENST00000469858 MLIPQ5VWP3 458 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms