RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 HGDQ93099 445 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 HSPBAP1Q96EW2 488 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 GSTO2Q9H4Y5 243 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 UTS2RQ9UKP6 389 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 PSME2Q9UL46 239 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 PLLPQ9Y342 182 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 MED12Q93074 2177 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 SERTM1A2A2V5 107 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 PCDH7O60245 1069 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 ULK1O75385 1050 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 ESRRBO95718 433 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 IL3P08700 152 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 PYGBP11216 843 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 PTPN6P29350 595 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 HMOX2P30519 316 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 ALDH9A1P49189 494 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 RPP38P78345 283 aaKnown RBP14.91□□□□□ -0.02
COL9A3-208ENST00000469802 MRPS35P82673 323 aaKnown RBP14.91□□□□□ -0.02
COL9A3-208ENST00000469802 CEBPEQ15744 281 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 SLC25A35Q3KQZ1 300 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 TRMT12Q53H54 448 aaKnown RBP14.91□□□□□ -0.02
COL9A3-208ENST00000469802 SPIN4Q56A73 249 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 ZNF628Q5EBL2 1059 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 NHSL2Q5HYW2 709 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 FAM180BQ6P0A1 224 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 SH2D5Q6ZV89 423 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 PACS2Q86VP3 889 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 LIX1Q8N485 282 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 OR10Q1Q8NGQ4 319 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 METTL6Q8TCB7 284 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 ERP27Q96DN0 273 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 OMA1Q96E52 524 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 LCORQ96JN0 433 aaPredicted RBP14.91□□□□□ -0.02
COL9A3-208ENST00000469802 KCNA7Q96RP8 456 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 PRDM14Q9GZV8 571 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 SIRT5Q9NXA8 310 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 DLGAP4Q9Y2H0 992 aa14.91□□□□□ -0.02
COL9A3-208ENST00000469802 C15orf38-AP3S2A0A0A6YYH1 394 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 FRG2CA6NGY1 282 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 FAM47E-STBD1D6RA91 191 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 G3V2L1 256 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 TO15178 435 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 CDH16O75309 829 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 RHOXF2BP0C7M4 288 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 DRD2P14416 443 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 PCSK2P16519 638 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 KRT15P19012 456 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 POU3F2P20265 443 aaPredicted RBP14.9□□□□□ -0.02
COL9A3-208ENST00000469802 DRD5P21918 477 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 TIA1P31483 386 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL9A3-208ENST00000469802 PTGDSP41222 190 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 PPICP45877 212 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 MASP1P48740 699 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 DCAF7P61962 342 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 HMGCS1Q01581 520 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 ACSF3Q4G176 576 aaPredicted RBP14.9□□□□□ -0.02
COL9A3-208ENST00000469802 TIGD3Q6B0B8 471 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 VASNQ6EMK4 673 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 DESI1Q6ICB0 168 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 GSPT2Q8IYD1 628 aaKnown RBP14.9□□□□□ -0.02
COL9A3-208ENST00000469802 LRRN4CLQ8ND94 238 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 OR52R1Q8NGF1 315 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 APIPQ96GX9 242 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 GNRHR2Q96P88 292 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 BTBD9Q96Q07 612 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 RHOXF2Q9BQY4 288 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 PRODH2Q9UF12 536 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 KCNN3Q9UGI6 736 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 BCAP29Q9UHQ4 241 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 ZNF780BQ9Y6R6 833 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 HIVEP1P15822 2718 aa14.9□□□□□ -0.02
COL9A3-208ENST00000469802 KDM4EB2RXH2 506 aaPredicted RBP14.89□□□□□ -0.03
COL9A3-208ENST00000469802 UBFD1O14562 309 aaKnown RBP14.89□□□□□ -0.03
COL9A3-208ENST00000469802 SNPHO15079 494 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 GSTM5P46439 218 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 DLX5P56178 289 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 ACSM2AQ08AH3 577 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 PLCXD2Q0VAA5 305 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 SNTA1Q13424 505 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 ACSM2BQ68CK6 577 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 SLC30A6Q6NXT4 461 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 ZYG11AQ6WRX3 759 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 NUP54Q7Z3B4 507 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 CDH24Q86UP0 819 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 CLYBLQ8N0X4 340 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 EIF1ADQ8N9N8 165 aaKnown RBP14.89□□□□□ -0.03
COL9A3-208ENST00000469802 RELL2Q8NC24 303 aaPredicted RBP14.89□□□□□ -0.03
COL9A3-208ENST00000469802 NAXEQ8NCW5 288 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 C16orf78Q8WTQ4 265 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 NODALQ96S42 347 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 TIMP4Q99727 224 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 OSBPL11Q9BXB4 747 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 SHCBP1LQ9BZQ2 653 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 METTL7AQ9H8H3 244 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 ALKBH4Q9NXW9 302 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 EHD3Q9NZN3 535 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 TBK1Q9UHD2 729 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 DCDC2Q9UHG0 476 aa14.89□□□□□ -0.03
COL9A3-208ENST00000469802 GPR55Q9Y2T6 319 aaPredicted RBP14.89□□□□□ -0.03
COL9A3-208ENST00000469802 L3MBTL1Q9Y468 752 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms