RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 COPS7AQ9UBW8 275 aa17.72■□□□□ 0.43
PCCB-208ENST00000468777 PACSIN3Q9UKS6 424 aa17.72■□□□□ 0.43
PCCB-208ENST00000468777 POMPQ9Y244 141 aa17.72■□□□□ 0.43
PCCB-208ENST00000468777 ASPDHA6ND91 283 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 NME6O75414 186 aaPredicted RBP17.71■□□□□ 0.43
PCCB-208ENST00000468777 CLPSP04118 112 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 DGKQP52824 942 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 MANFP55145 182 aaKnown RBP17.71■□□□□ 0.43
PCCB-208ENST00000468777 CEACAM7Q14002 265 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 MYBPC3Q14896 1274 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 SEMA4CQ9C0C4 833 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 ZNF552Q9H707 407 aaPredicted RBP17.71■□□□□ 0.43
PCCB-208ENST00000468777 IL1RL2Q9HB29 575 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 ZBTB20Q9HC78 741 aaPredicted RBP17.71■□□□□ 0.43
PCCB-208ENST00000468777 ATAD3AQ9NVI7 634 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 TLN1Q9Y490 2541 aaKnown RBP17.71■□□□□ 0.43
PCCB-208ENST00000468777 K7EM74 188 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 MAN1A2O60476 641 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 CEACAM4O75871 244 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 S1PR1P21453 382 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 MC3RP41968 323 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 FRKP42685 505 aaPredicted RBP17.71■□□□□ 0.43
PCCB-208ENST00000468777 CLNS1AP54105 237 aaKnown RBP17.71■□□□□ 0.43
PCCB-208ENST00000468777 SOX8P57073 446 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 PHC1P78364 1004 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 PAGE3Q5JUK9 113 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 IRAK1BP1Q5VVH5 260 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 C16orf47Q6ZP98 133 aaPredicted RBP17.71■□□□□ 0.43
PCCB-208ENST00000468777 CAMKMTQ7Z624 323 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 ANKRD46Q86W74 232 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 OR7G2Q8NG99 324 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 STMN2Q93045 179 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 TESCQ96BS2 214 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 CTHRC1Q96CG8 243 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 ZBED6CLQ96FA7 236 aaPredicted RBP17.71■□□□□ 0.43
PCCB-208ENST00000468777 ABHD17AQ96GS6 310 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 MAGED4Q96JG8 741 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 SLC39A3Q9BRY0 314 aa17.71■□□□□ 0.43
PCCB-208ENST00000468777 CBX7O95931 251 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 ME2P23368 584 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 GPC1P35052 558 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 KIR3DL1P43629 444 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 CDK9P50750 372 aaKnown RBP17.7■□□□□ 0.42
PCCB-208ENST00000468777 WNT3P56703 355 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 SLC37A1P57057 533 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 RHDQ02161 417 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 FUT7Q11130 342 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 MAP4K2Q12851 820 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 DUSP8Q13202 625 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 NFYCQ13952 458 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 HSDL2Q6YN16 418 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 LINC00696Q6ZRV3 163 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 C9orf40Q8IXQ3 194 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 CLECL1Q8IZS7 167 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 RNF148Q8N7C7 305 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 ZNF675Q8TD23 568 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 LRRC58Q96CX6 371 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 ART5Q96L15 291 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 GPATCH1Q9BRR8 931 aaKnown RBP17.7■□□□□ 0.42
PCCB-208ENST00000468777 DEFB126Q9BYW3 111 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 BHLHE41Q9C0J9 482 aaPredicted RBP17.7■□□□□ 0.42
PCCB-208ENST00000468777 DCLRE1BQ9H816 532 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 RNPEPL1Q9HAU8 725 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 TMEM181Q9P2C4 612 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 BCAP29Q9UHQ4 241 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 LHX6Q9UPM6 363 aa17.7■□□□□ 0.42
PCCB-208ENST00000468777 A0A1W2PRB8 838 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 PDGFAP04085 211 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 RNF111Q6ZNA4 994 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 OR52R1Q8NGF1 315 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 OR8J2Q8NGG1 315 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 OR10A5Q9H207 317 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 ACSS1Q9NUB1 689 aaPredicted RBP17.69■□□□□ 0.42
PCCB-208ENST00000468777 ZNF639Q9UID6 485 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 MAPRE3Q9UPY8 281 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 DTX4Q9Y2E6 619 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 PRRC2CQ9Y520 2896 aaKnown RBP17.69■□□□□ 0.42
PCCB-208ENST00000468777 CPAMD8Q8IZJ3 1885 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 MKRN2OSH3BPM6 223 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 FXYD1O00168 92 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 C6orf47O95873 294 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 NPPAP01160 153 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 IL6P05231 212 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 ABCB1P08183 1280 aaPredicted RBP17.69■□□□□ 0.42
PCCB-208ENST00000468777 DDX5P17844 614 aaKnown RBP17.69■□□□□ 0.42
PCCB-208ENST00000468777 RNF4P78317 190 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 SRSF11Q05519 484 aaKnown RBP17.69■□□□□ 0.42
PCCB-208ENST00000468777 KCNAB2Q13303 367 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 SAMD4BQ5PRF9 694 aaKnown RBP17.69■□□□□ 0.42
PCCB-208ENST00000468777 AGAP7PQ5VUJ5 663 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 TCTN3Q6NUS6 607 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 JMJD6Q6NYC1 403 aaPredicted RBP17.69■□□□□ 0.42
PCCB-208ENST00000468777 PCSK4Q6UW60 755 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 DPP10Q8N608 796 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 ZNF615Q8N8J6 731 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 EXD3Q8N9H8 876 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 AGAP4Q96P64 663 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 GAL3ST4Q96RP7 486 aa17.69■□□□□ 0.42
PCCB-208ENST00000468777 TMEM200CA6NKL6 621 aa17.68■□□□□ 0.42
PCCB-208ENST00000468777 PSMG1O95456 288 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms