RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 OR2B3O76000 313 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 CPSF4O95639 269 aaKnown RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 GPANK1O95872 356 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 TBX6O95947 436 aaPredicted RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 MT-CO3P00414 261 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 SERPINA6P08185 405 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 IL3P08700 152 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 FAM58BPP0C7Q3 252 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 PRPS2P11908 318 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 BCKDHAP12694 445 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 COX4I1P13073 169 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 HSD3B1P14060 373 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 ALOX12P18054 663 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 IL1RNP18510 177 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 NELFEP18615 380 aaKnown RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 SDC1P18827 310 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 EFNA1P20827 205 aaPredicted RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 GPX3P22352 226 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 CERS1P27544 350 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 SERPINB1P30740 379 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 TIA1P31483 386 aaKnown RBP eCLIP3.84□□□□□ -1.795e-7■□□□□ 8.1
TMEM39A-204ENST00000468545 PTGS2P35354 604 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 BSGP35613 385 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 OR1D4P47884 311 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 AVPR1BP47901 424 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 ACADVLP49748 655 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 DGKQP52824 942 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 MAPK12P53778 367 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 TAS2R50P59544 299 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 ERVK-8P63133 956 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 RAE1P78406 368 aaKnown RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 SIM1P81133 766 aaPredicted RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 MXRA7P84157 204 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 MAT1AQ00266 395 aaKnown RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 E2F1Q01094 437 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 MC1RQ01726 317 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF33BQ06732 778 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 PIGFQ07326 219 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 FOXE3Q13461 319 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 CUL3Q13618 768 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 TUBA3CQ13748 450 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 RUNX2Q13950 521 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 E2F2Q14209 437 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 ERV3-1Q14264 604 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 SQLEQ14534 574 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 PTGR1Q14914 329 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 C16orf72Q14CZ0 275 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 KIAA0040Q15053 153 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 GSTA3Q16772 222 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 NDUFA9Q16795 377 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 BEAN1Q3B7T3 259 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 MMEL1Q495T6 779 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 DEFB134Q4QY38 66 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 TMEM35AQ53FP2 167 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 SPIN4Q56A73 249 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 METTL21CQ5VZV1 264 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 ANKRD26P1Q6NSI1 321 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 FAM180BQ6P0A1 224 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 TRIM40Q6P9F5 258 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 TUBA3EQ6PEY2 450 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 RBM44Q6ZP01 1051 aaKnown RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 CCDC121Q6ZUS5 278 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 RNF44Q7L0R7 432 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 ABHD13Q7L211 337 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 PRSS41Q7RTY9 318 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 PAGE2Q7Z2X7 111 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 COMMD6Q7Z4G1 85 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 ARHGAP22Q7Z5H3 698 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 MARCH9Q86YJ5 346 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 MMP21Q8N119 569 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 METTL4Q8N3J2 472 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 TMEM132CQ8N3T6 1108 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 CHCHD4Q8N4Q1 142 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 KRTCAP2Q8N6L1 136 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 SRFBP1Q8NEF9 429 aaKnown RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 OR2L5Q8NG80 312 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 OR4D9Q8NGE8 314 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 OR5T3Q8NGG3 340 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 OR9I1Q8NGQ6 314 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 OR9A4Q8NGU2 314 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 OR1L3Q8NH93 324 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 NT5CQ8TCD5 201 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 UTP15Q8TED0 518 aaKnown RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 C16orf78Q8WTQ4 265 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 LRTOMTQ8WZ04 291 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 UCN3Q969E3 161 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 TM4SF18Q96CE8 201 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 MS4A6EQ96DS6 147 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 TM4SF19Q96DZ7 209 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 MMABQ96EY8 250 aaPredicted RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 MARS2Q96GW9 593 aaKnown RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 NSL1Q96IY1 281 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 EGLN2Q96KS0 407 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 QRFPRQ96P65 431 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 OR6C1Q96RD1 312 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 NPAS2Q99743 824 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 TBCDQ9BTW9 1192 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 CNPPD1Q9BV87 410 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 CCDC106Q9BWC9 280 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 STRADBQ9C0K7 418 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms