RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 WBP1Q96G27 269 aa14.83□□□□□ -0.04
GPC1-207ENST00000466624 VSTM2LQ96N03 204 aa14.83□□□□□ -0.04
GPC1-207ENST00000466624 PANX1Q96RD7 426 aa14.83□□□□□ -0.04
GPC1-207ENST00000466624 NPAS2Q99743 824 aa14.83□□□□□ -0.04
GPC1-207ENST00000466624 ARHGAP9Q9BRR9 750 aa14.83□□□□□ -0.04
GPC1-207ENST00000466624 RNF32Q9H0A6 362 aa14.83□□□□□ -0.04
GPC1-207ENST00000466624 ANKRA2Q9H9E1 313 aa14.83□□□□□ -0.04
GPC1-207ENST00000466624 ZCCHC3Q9NUD5 404 aaKnown RBP14.83□□□□□ -0.04
GPC1-207ENST00000466624 ABI3Q9P2A4 366 aa14.83□□□□□ -0.04
GPC1-207ENST00000466624 ERVK-11Q9UQG0 969 aa14.83□□□□□ -0.04
GPC1-207ENST00000466624 EXPH5Q8NEV8 1989 aa14.83□□□□□ -0.04
GPC1-207ENST00000466624 EPG5Q9HCE0 2579 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 TNRC6AQ8NDV7 1962 aaKnown RBP14.82□□□□□ -0.04
GPC1-207ENST00000466624 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 ASPDHA6ND91 283 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 A8MUI8 341 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 RFXANKO14593 260 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 DCTN3O75935 186 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 CPSF4O95639 269 aaKnown RBP14.82□□□□□ -0.04
GPC1-207ENST00000466624 ABCB1P08183 1280 aaPredicted RBP14.82□□□□□ -0.04
GPC1-207ENST00000466624 PPICP45877 212 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 KCNAB2Q13303 367 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 VPS26BQ4G0F5 336 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 COQ5Q5HYK3 327 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 ABHD17BQ5VST6 288 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 HLA-DQA1Q5Y7H0 255 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 SLC15A4Q8N697 577 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 GIMAP5Q96F15 307 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 BTBD9Q96Q07 612 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 PHF12Q96QT6 1004 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 CCDC106Q9BWC9 280 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 ITPAQ9BY32 194 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 CDCP1Q9H5V8 836 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 EPS8L2Q9H6S3 715 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 FOLH1BQ9HBA9 442 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 LEF1Q9UJU2 399 aaPredicted RBP14.82□□□□□ -0.04
GPC1-207ENST00000466624 VPS4AQ9UN37 437 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 DTX4Q9Y2E6 619 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 YARS2Q9Y2Z4 477 aaKnown RBP14.82□□□□□ -0.04
GPC1-207ENST00000466624 NDUFAF1Q9Y375 327 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 SNX8Q9Y5X2 465 aa14.82□□□□□ -0.04
GPC1-207ENST00000466624 FRG2CA6NGY1 282 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 BBIP1A8MTZ0 92 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 NDUFAB1O14561 156 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 ANGPT2O15123 496 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 ACOX3O15254 700 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 ITGA10O75578 1167 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 SOX30O94993 753 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 KRT16P08779 473 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 DRD5P21918 477 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 TRHRP34981 398 aaPredicted RBP14.81□□□□□ -0.04
GPC1-207ENST00000466624 SOAT1P35610 550 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 MAP3K8P41279 467 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 PRIM2P49643 509 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 RAPSNQ13702 412 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 SPDYE7PQ495Y7 208 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 PIGGQ5H8A4 983 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 EXOSC6Q5RKV6 272 aaKnown RBP14.81□□□□□ -0.04
GPC1-207ENST00000466624 LRIF1Q5T3J3 769 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 B3GNTL1Q67FW5 361 aaPredicted RBP14.81□□□□□ -0.04
GPC1-207ENST00000466624 MFSD12Q6NUT3 480 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 IGFL3Q6UXB1 125 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 DPP10Q8N608 796 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 CDRT4Q8N9R6 151 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 CCDC197Q8NCU1 140 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 SLC22A8Q8TCC7 542 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 BCAS4Q8TDM0 211 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 TM9SF4Q92544 642 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 HSPBAP1Q96EW2 488 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 ABHD17AQ96GS6 310 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 MAGED4Q96JG8 741 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 LCORQ96JN0 433 aaPredicted RBP14.81□□□□□ -0.04
GPC1-207ENST00000466624 GAL3ST4Q96RP7 486 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 INPP5KQ9BT40 448 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 LMF2Q9BU23 707 aaKnown RBP14.81□□□□□ -0.04
GPC1-207ENST00000466624 GIN1Q9NXP7 522 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 STMN3Q9NZ72 180 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 ARMCX1Q9P291 453 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 GPR55Q9Y2T6 319 aaPredicted RBP14.81□□□□□ -0.04
GPC1-207ENST00000466624 ZNF451Q9Y4E5 1061 aa14.81□□□□□ -0.04
GPC1-207ENST00000466624 ITPR1Q14643 2758 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 A0A096LPI6 279 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 RNF103-CHMP3A0A140T963 221 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 TO15178 435 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 ERN1O75460 977 aaKnown RBP14.8□□□□□ -0.04
GPC1-207ENST00000466624 HMGN2P05204 90 aaKnown RBP14.8□□□□□ -0.04
GPC1-207ENST00000466624 SFTPCP11686 197 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 CD1EP15812 388 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 HOXB9P17482 250 aaPredicted RBP14.8□□□□□ -0.04
GPC1-207ENST00000466624 PTPN6P29350 595 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 CDKN2CP42773 168 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 TXNL4AP83876 142 aaKnown RBP14.8□□□□□ -0.04
GPC1-207ENST00000466624 ZNF155Q12901 538 aaPredicted RBP14.8□□□□□ -0.04
GPC1-207ENST00000466624 GAB1Q13480 694 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 ZNHIT3Q15649 155 aaPredicted RBP14.8□□□□□ -0.04
GPC1-207ENST00000466624 PAGE3Q5JUK9 113 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 SAXO2Q658L1 398 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 FAM91A1Q658Y4 838 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 FCRLBQ6BAA4 426 aa14.8□□□□□ -0.04
GPC1-207ENST00000466624 SLC2A7Q6PXP3 512 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms