RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 SH3GL2Q99962 352 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 GPATCH1Q9BRR8 931 aaKnown RBP17.5■□□□□ 0.39
COL9A3-206ENST00000466532 FAIM2Q9BWQ8 316 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 C1QTNF3Q9BXJ4 246 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 UGT2B28Q9BY64 529 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 CRIM1Q9NZV1 1036 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 ZNF629Q9UEG4 869 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-206ENST00000466532 TRPS1Q9UHF7 1281 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 ZNF639Q9UID6 485 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 AKAP6Q13023 2319 aa17.5■□□□□ 0.39
COL9A3-206ENST00000466532 IST1P53990 364 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 PLCXD2Q0VAA5 305 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 TEX35Q5T0J7 233 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 DCST1Q5T197 706 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 NSUN5P2Q63ZY6 315 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 FAM180BQ6P0A1 224 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 NUP54Q7Z3B4 507 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 TMEM151AQ8N4L1 468 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 C1orf52Q8N6N3 182 aaKnown RBP17.49■□□□□ 0.39
COL9A3-206ENST00000466532 NOA1Q8NC60 698 aaKnown RBP17.49■□□□□ 0.39
COL9A3-206ENST00000466532 RNASE6Q93091 150 aaKnown RBP17.49■□□□□ 0.39
COL9A3-206ENST00000466532 HGDQ93099 445 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 NTNG2Q96CW9 530 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 TRIB1Q96RU8 372 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 NODALQ96S42 347 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 ZNF225Q9UK10 706 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 PLLPQ9Y342 182 aa17.49■□□□□ 0.39
COL9A3-206ENST00000466532 A0A087WUV0 522 aaPredicted RBP17.48■□□□□ 0.39
COL9A3-206ENST00000466532 ACOX3O15254 700 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 ESRRBO95718 433 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 CBX7O95931 251 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 SNRPAP09012 282 aaKnown RBP17.48■□□□□ 0.39
COL9A3-206ENST00000466532 ECHS1P30084 290 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 SOX18P35713 384 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 HSD17B3P37058 310 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 ZNF136P52737 540 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 TRA2BP62995 288 aaKnown RBP17.48■□□□□ 0.39
COL9A3-206ENST00000466532 CLCQ05315 142 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 LTB4RQ15722 352 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 FBXL19-AS1Q494R0 122 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 FLYWCH1Q4VC44 716 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 TRMT12Q53H54 448 aaKnown RBP17.48■□□□□ 0.39
COL9A3-206ENST00000466532 TCHHL1Q5QJ38 904 aaPredicted RBP17.48■□□□□ 0.39
COL9A3-206ENST00000466532 SLC30A6Q6NXT4 461 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 TMEM81Q6P7N7 255 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 POMZP3Q6PJE2 187 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 YRDCQ86U90 279 aaKnown RBP17.48■□□□□ 0.39
COL9A3-206ENST00000466532 CDYL2Q8N8U2 506 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 FAM83FQ8NEG4 500 aaPredicted RBP17.48■□□□□ 0.39
COL9A3-206ENST00000466532 OR52R1Q8NGF1 315 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 ABTB1Q969K4 478 aaPredicted RBP17.48■□□□□ 0.39
COL9A3-206ENST00000466532 CTHRC1Q96CG8 243 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 CNRIP1Q96F85 164 aaPredicted RBP17.48■□□□□ 0.39
COL9A3-206ENST00000466532 WDYHV1Q96HA8 205 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 OSBPL11Q9BXB4 747 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 EHD3Q9NZN3 535 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 KLRF1Q9NZS2 232 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 VPS29Q9UBQ0 182 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 PRODH2Q9UF12 536 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 ZNF780BQ9Y6R6 833 aa17.48■□□□□ 0.39
COL9A3-206ENST00000466532 SETD2Q9BYW2 2564 aaPredicted RBP17.48■□□□□ 0.39
COL9A3-206ENST00000466532 C2orf72A6NCS6 295 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 SNPHO15079 494 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 ICOSLGO75144 302 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 SUPT7LO94864 414 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 PCSK2P16519 638 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 TAC1P20366 129 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 PTGDSP41222 190 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 NAGLUP54802 743 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 DCAF7P61962 342 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 MRPS35P82673 323 aaKnown RBP17.47■□□□□ 0.39
COL9A3-206ENST00000466532 ZNF592Q92610 1267 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 ZNF681Q96N22 645 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 CLEC4MQ9H2X3 399 aaPredicted RBP17.47■□□□□ 0.39
COL9A3-206ENST00000466532 EPB41L4BQ9H329 900 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 GALNT9Q9HCQ5 603 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 PFDN4Q9NQP4 134 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 RASSF1Q9NS23 344 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 HEY2Q9UBP5 337 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 FOXD3Q9UJU5 478 aaPredicted RBP17.47■□□□□ 0.39
COL9A3-206ENST00000466532 UTS2RQ9UKP6 389 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 MAPRE3Q9UPY8 281 aa17.47■□□□□ 0.39
COL9A3-206ENST00000466532 PRRC2AP48634 2157 aaKnown RBP17.46■□□□□ 0.39
COL9A3-206ENST00000466532 EXOC1LA0A1B0GW35 172 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 MBD3L4A6NDZ8 208 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-206ENST00000466532 MBD3L3A6NE82 208 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-206ENST00000466532 MBD3L5A6NJ08 208 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-206ENST00000466532 CD8B2A6NJW9 211 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 MANBAO00462 879 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 UGT2B11O75310 529 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 ACTL6AO96019 429 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 KRT6AP02538 564 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 KRT6BP04259 564 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 RHOXF2BP0C7M4 288 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 HSD3B1P14060 373 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 DRD5P21918 477 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 HSD3B2P26439 372 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 GCKP35557 465 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 PPICP45877 212 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 KRT6CP48668 564 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 200.7 ms