RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 BTBD9Q96Q07 612 aa18.76■□□□□ 0.59
SKA3-205ENST00000465471 PRPF18Q99633 342 aaKnown RBP18.76■□□□□ 0.59
SKA3-205ENST00000465471 GPR55Q9Y2T6 319 aaPredicted RBP18.76■□□□□ 0.59
SKA3-205ENST00000465471 ASPDHA6ND91 283 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 EDF1O60869 148 aaKnown RBP18.75■□□□□ 0.59
SKA3-205ENST00000465471 COQ9O75208 318 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 DRD5P21918 477 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 PPICP45877 212 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 CDK9P50750 372 aaKnown RBP18.75■□□□□ 0.59
SKA3-205ENST00000465471 MANFP55145 182 aaKnown RBP18.75■□□□□ 0.59
SKA3-205ENST00000465471 HSPB3Q12988 150 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 RTL4Q6ZR62 310 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 GALNTL5Q7Z4T8 443 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 TAGAPQ8N103 731 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 PSD4Q8NDX1 1056 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 OR8J2Q8NGG1 315 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 CEP70Q8NHQ1 597 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 STON2Q8WXE9 905 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 TMEM125Q96AQ2 219 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 LCORQ96JN0 433 aaPredicted RBP18.75■□□□□ 0.59
SKA3-205ENST00000465471 SGCZQ96LD1 299 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 DPY30Q9C005 99 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 CLMPQ9H6B4 373 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 FOLH1BQ9HBA9 442 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 KLHL1Q9NR64 748 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 SIRT3Q9NTG7 399 aaPredicted RBP18.75■□□□□ 0.59
SKA3-205ENST00000465471 NBASA2RRP1 2371 aa18.75■□□□□ 0.59
SKA3-205ENST00000465471 FRG2CA6NGY1 282 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 TO15178 435 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 ACOX3O15254 700 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 DIAPH2O60879 1101 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 CT45A8P0DMV1 189 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 CT45A9P0DMV2 189 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 WNT3P56703 355 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 FOXK1P85037 733 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 NTRK2Q16620 822 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 LSM12Q3MHD2 195 aaKnown RBP18.74■□□□□ 0.59
SKA3-205ENST00000465471 CT45A2Q5DJT8 189 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 ZNF324BQ6AW86 544 aaPredicted RBP18.74■□□□□ 0.59
SKA3-205ENST00000465471 HOXB13Q92826 284 aaPredicted RBP18.74■□□□□ 0.59
SKA3-205ENST00000465471 HSPBAP1Q96EW2 488 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 TEX37Q96LM6 180 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 DUSP26Q9BV47 211 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 TIMMDC1Q9NPL8 285 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 DDX18Q9NVP1 670 aaKnown RBP18.74■□□□□ 0.59
SKA3-205ENST00000465471 ASF1BQ9NVP2 202 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 TAS2R9Q9NYW1 312 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 ERVK-11Q9UQG0 969 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 KLF13Q9Y2Y9 288 aaPredicted RBP18.74■□□□□ 0.59
SKA3-205ENST00000465471 NPFFR2Q9Y5X5 522 aa18.74■□□□□ 0.59
SKA3-205ENST00000465471 COPG1Q9Y678 874 aaKnown RBP18.74■□□□□ 0.59
SKA3-205ENST00000465471 A0A1W2PRB8 838 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 TCP11X1B4DZS4 312 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 SCN2BO60939 215 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 NME6O75414 186 aaPredicted RBP18.73■□□□□ 0.59
SKA3-205ENST00000465471 RASAL1O95294 804 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 IDO1P14902 403 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 EFNA1P20827 205 aaPredicted RBP18.73■□□□□ 0.59
SKA3-205ENST00000465471 ABCD3P28288 659 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 IDH3AP50213 366 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 CLNS1AP54105 237 aaKnown RBP18.73■□□□□ 0.59
SKA3-205ENST00000465471 SRSF11Q05519 484 aaKnown RBP18.73■□□□□ 0.59
SKA3-205ENST00000465471 DPY19L1Q2PZI1 675 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 TMEM198Q66K66 360 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 NXNQ6DKJ4 435 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 NPSR1Q6W5P4 371 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 GRHL3Q8TE85 626 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 PAQR8Q8TEZ7 354 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 OR5P2Q8WZ92 322 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 FRMD6Q96NE9 622 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 EBF4Q9BQW3 602 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 TRIM4Q9C037 500 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 CCDC134Q9H6E4 229 aa18.73■□□□□ 0.59
SKA3-205ENST00000465471 CHCHD2Q9Y6H1 151 aaPredicted RBP18.73■□□□□ 0.59
SKA3-205ENST00000465471 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 DYNC1I1O14576 645 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 ERN1O75460 977 aaKnown RBP18.72■□□□□ 0.59
SKA3-205ENST00000465471 NAGAP17050 411 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 IL12AP29459 219 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 GPC1P35052 558 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 MAP3K8P41279 467 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 MRPL19P49406 292 aaKnown RBP18.72■□□□□ 0.59
SKA3-205ENST00000465471 AQP5P55064 265 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 NRG3P56975 720 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 CORO7P57737 925 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 UFM1P61960 85 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 PSPHP78330 225 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 PHC1P78364 1004 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 PSG6Q00889 435 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 NNATQ16517 81 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 MAPKAPK3Q16644 382 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 GSTA3Q16772 222 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 PDCD4Q53EL6 469 aaKnown RBP18.72■□□□□ 0.59
SKA3-205ENST00000465471 OR4F3Q6IEY1 312 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 FAM180AQ6UWF9 173 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 TMEM64Q6YI46 380 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 ACAD11Q709F0 780 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 DNAJB8Q8NHS0 232 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 FAR1Q8WVX9 515 aa18.72■□□□□ 0.59
SKA3-205ENST00000465471 GIMAP5Q96F15 307 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms