RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 KRT72Q14CN4 511 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 ZNHIT3Q15649 155 aaPredicted RBP13.64□□□□□ -0.23
HLA-F-223ENST00000465459 TBR1Q16650 682 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 MMEL1Q495T6 779 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 PAGE3Q5JUK9 113 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 AGAP7PQ5VUJ5 663 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 RPS19BP1Q86WX3 136 aaKnown RBP13.64□□□□□ -0.23
HLA-F-223ENST00000465459 TREML1Q86YW5 311 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 KIF2BQ8N4N8 673 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 SLC15A4Q8N697 577 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 FITM2Q8N6M3 262 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 ZNF441Q8N8Z8 693 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 CDRT4Q8N9R6 151 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 BRIX1Q8TDN6 353 aaKnown RBP13.64□□□□□ -0.23
HLA-F-223ENST00000465459 HOXB13Q92826 284 aaPredicted RBP13.64□□□□□ -0.23
HLA-F-223ENST00000465459 NEURL3Q96EH8 262 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 MAGED4Q96JG8 741 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 VSTM2LQ96N03 204 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 AGAP4Q96P64 663 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 BTBD9Q96Q07 612 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 WWTR1Q9GZV5 400 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 PAIP1Q9H074 479 aaKnown RBP13.64□□□□□ -0.23
HLA-F-223ENST00000465459 GIN1Q9NXP7 522 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 MYOTQ9UBF9 498 aa13.64□□□□□ -0.23
HLA-F-223ENST00000465459 PCDHGA9Q9Y5G4 932 aaKnown RBP13.64□□□□□ -0.23
HLA-F-223ENST00000465459 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 TMEM200CA6NKL6 621 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 MASP2O00187 686 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 FBP2O00757 339 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 ACOX3O15254 700 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 DNAJB5O75953 348 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 ALPPP05187 535 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 HMGN2P05204 90 aaKnown RBP13.63□□□□□ -0.23
HLA-F-223ENST00000465459 HOXB9P17482 250 aaPredicted RBP13.63□□□□□ -0.23
HLA-F-223ENST00000465459 SOX11P35716 441 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 CHI3L1P36222 383 aaPredicted RBP13.63□□□□□ -0.23
HLA-F-223ENST00000465459 MAP3K8P41279 467 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 CDKN2CP42773 168 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 CCL11P51671 97 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 MNAT1P51948 309 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 PRKAG1P54619 331 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 MLF1P58340 268 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 GAB1Q13480 694 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 MEP1AQ16819 746 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 EXOSC6Q5RKV6 272 aaKnown RBP13.63□□□□□ -0.23
HLA-F-223ENST00000465459 SAXO2Q658L1 398 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 MFSD12Q6NUT3 480 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 ISLR2Q6UXK2 745 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 C6orf120Q7Z4R8 191 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 RETREG3Q86VR2 466 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 SIMC1Q8NDZ2 872 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 MIPOL1Q8TD10 442 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 ZFP90Q8TF47 636 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 ADIPOR1Q96A54 375 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 ROPN1LQ96C74 230 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 HSPBAP1Q96EW2 488 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 GIMAP5Q96F15 307 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 LCORQ96JN0 433 aaPredicted RBP13.63□□□□□ -0.23
HLA-F-223ENST00000465459 LMF1Q96S06 567 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 SLC35A5Q9BS91 424 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 LMF2Q9BU23 707 aaKnown RBP13.63□□□□□ -0.23
HLA-F-223ENST00000465459 ACTRT3Q9BYD9 372 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 RAD21L1Q9H4I0 556 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 EPS8L2Q9H6S3 715 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 ANKRA2Q9H9E1 313 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 EFCAB1Q9HAE3 211 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 FOLH1BQ9HBA9 442 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 GPATCH2Q9NW75 528 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 GID8Q9NWU2 228 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 GPR83Q9NYM4 423 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 ABI3Q9P2A4 366 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 MAP10Q9P2G4 905 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 FAF1Q9UNN5 650 aaPredicted RBP13.63□□□□□ -0.23
HLA-F-223ENST00000465459 GPR55Q9Y2T6 319 aaPredicted RBP13.63□□□□□ -0.23
HLA-F-223ENST00000465459 YARS2Q9Y2Z4 477 aaKnown RBP13.63□□□□□ -0.23
HLA-F-223ENST00000465459 PCDHB14Q9Y5E9 798 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 PCDHGB7Q9Y5F8 929 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 DOCK10Q96BY6 2186 aa13.63□□□□□ -0.23
HLA-F-223ENST00000465459 TRBV5-3A0A0A0MS03 114 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 FRG2CA6NGY1 282 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 DUXAA6NLW8 204 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 A8MUI8 341 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 MKRN2OSH3BPM6 223 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 MRASO14807 208 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 TO15178 435 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 PRKNO60260 465 aaPredicted RBP13.62□□□□□ -0.23
HLA-F-223ENST00000465459 GSNP06396 782 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 ANXA11P50995 505 aaKnown RBP13.62□□□□□ -0.23
HLA-F-223ENST00000465459 CBX1P83916 185 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 RHDQ02161 417 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 ZNF155Q12901 538 aaPredicted RBP13.62□□□□□ -0.23
HLA-F-223ENST00000465459 TP53BP2Q13625 1128 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 NFYCQ13952 458 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 ST3GAL2Q16842 350 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 TRMT5Q32P41 509 aaKnown RBP13.62□□□□□ -0.23
HLA-F-223ENST00000465459 PIGGQ5H8A4 983 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 ACER2Q5QJU3 275 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 ABHD17BQ5VST6 288 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 REP15Q6BDI9 236 aa13.62□□□□□ -0.23
HLA-F-223ENST00000465459 TCTN3Q6NUS6 607 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms