RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 L3MBTL1Q9Y468 752 aa13.14□□□□□ -0.31
SNRNP40-203ENST00000463988 ZNF780BQ9Y6R6 833 aa13.14□□□□□ -0.31
SNRNP40-203ENST00000463988 ARHGAP21Q5T5U3 1957 aa13.14□□□□□ -0.31
SNRNP40-203ENST00000463988 EXPH5Q8NEV8 1989 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 KIF2AO00139 706 aaPredicted RBP13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 SYT5O00445 386 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 DVL2O14641 736 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 TO15178 435 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 DLX3O60479 287 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 ULK1O75385 1050 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 BCAS2O75934 225 aaPredicted RBP13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 SUPT7LO94864 414 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 CBX7O95931 251 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 RHOXF2BP0C7M4 288 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 DRD5P21918 477 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 ATP5F1P24539 256 aaPredicted RBP13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 SOX18P35713 384 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 PSPHP78330 225 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 EXOSC7Q15024 291 aaKnown RBP13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 TEX35Q5T0J7 233 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 SLC30A6Q6NXT4 461 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 ARSKQ6UWY0 536 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 GPRIN3Q6ZVF9 776 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 WDR53Q7Z5U6 358 aaPredicted RBP13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 SLC22A9Q8IVM8 553 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 PRR22Q8IZ63 422 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 MMP21Q8N119 569 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 CDYL2Q8N8U2 506 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 ZNF675Q8TD23 568 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 ACMSDQ8TDX5 336 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 HGDQ93099 445 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 ITPAQ9BY32 194 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 SHCBP1LQ9BZQ2 653 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 METTL7AQ9H8H3 244 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 TMEM216Q9P0N5 145 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 ZNF629Q9UEG4 869 aaPredicted RBP13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 BCAP29Q9UHQ4 241 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 ITPR3Q14573 2671 aa13.13□□□□□ -0.31
SNRNP40-203ENST00000463988 AKAP6Q13023 2319 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 MAP1AP78559 2803 aaPredicted RBP13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 CCDC151A5D8V7 595 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 CD8B2A6NJW9 211 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 ZWINTO95229 277 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 ENO1P06733 434 aaKnown RBP13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 GSTA1P08263 222 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 PTPN6P29350 595 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 EMDP50402 254 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 PRKAA2P54646 552 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 PKNOX1P55347 436 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 LCP2Q13094 533 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 FBXL19-AS1Q494R0 122 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 TRMT12Q53H54 448 aaKnown RBP13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 SPIN4Q56A73 249 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 NSUN5P2Q63ZY6 315 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 TMEM200AQ86VY9 491 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 IFT20Q8IY31 132 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 ADCY4Q8NFM4 1077 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 OR1J4Q8NGS1 313 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 METTL6Q8TCB7 284 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 OMA1Q96E52 524 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 L3HYPDHQ96EM0 354 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 LRRC46Q96FV0 321 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 TMEM237Q96Q45 408 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 HBEGFQ99075 208 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 HEY2Q9UBP5 337 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 FOXD3Q9UJU5 478 aaPredicted RBP13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 UTS2RQ9UKP6 389 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 NFU1Q9UMS0 254 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 PLLPQ9Y342 182 aa13.12□□□□□ -0.31
SNRNP40-203ENST00000463988 MED13LQ71F56 2210 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 SERTM1A2A2V5 107 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 FRG2CA6NGY1 282 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 OR6C70A6NIJ9 312 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 SNPHO15079 494 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 RIPK2O43353 540 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 ABCB7O75027 752 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 ICOSLGO75144 302 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 ESRRBO95718 433 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 ACTL6AO96019 429 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 IL2RAP01589 272 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 PCSK2P16519 638 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 BMP7P18075 431 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 GSTM5P46439 218 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 ALDH9A1P49189 494 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 ASCL1P50553 236 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 DUSP2Q05923 314 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 PLCXD2Q0VAA5 305 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 HEPACAMQ14CZ8 416 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 EIPR1Q53HC9 387 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 ZNF628Q5EBL2 1059 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 TCHHL1Q5QJ38 904 aaPredicted RBP13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 GALNT18Q6P9A2 607 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 ANGPTL8Q6UXH0 198 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 CEP112Q8N8E3 955 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 SIMC1Q8NDZ2 872 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 TNIP2Q8NFZ5 429 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 OR52R1Q8NGF1 315 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 ABTB1Q969K4 478 aaPredicted RBP13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 C11orf24Q96F05 449 aaPredicted RBP13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 WDYHV1Q96HA8 205 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms