RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 ZNF639Q9UID6 485 aa12.37□□□□□ -0.43
COMMD3-205ENST00000463688 TIMM22Q9Y584 194 aa12.37□□□□□ -0.43
COMMD3-205ENST00000463688 OR6C70A6NIJ9 312 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 NPIPA2E9PIF3 369 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 NPIPA3F8WFD2 350 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 SEC22BO75396 215 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 PDE9AO76083 593 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 GPX3P22352 226 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 IL12BP29460 328 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 RFC3P40938 356 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 MAGEA5P43359 124 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 DNASE1L1P49184 302 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 HMGCS1Q01581 520 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 BTKQ06187 659 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 CEBPEQ15744 281 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 NOXRED1Q6NXP6 359 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 GDF7Q7Z4P5 450 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 GSPT2Q8IYD1 628 aaKnown RBP12.36□□□□□ -0.43
COMMD3-205ENST00000463688 CCDC116Q8IYX3 515 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 MREGQ8N565 214 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 BANPQ8N9N5 519 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 OR52R1Q8NGF1 315 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 OR52N2Q8NGI0 321 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 CEP70Q8NHQ1 597 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 PPP1R14CQ8TAE6 165 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 MARVELD3Q96A59 401 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 MTERF3Q96E29 417 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 ZBED6CLQ96FA7 236 aaPredicted RBP12.36□□□□□ -0.43
COMMD3-205ENST00000463688 PPP3R2Q96LZ3 170 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 COL21A1Q96P44 957 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 DMRTA2Q96SC8 542 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 SPOCK3Q9BQ16 436 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 ANKZF1Q9H8Y5 726 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 LRTM1Q9HBL6 345 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 KCNJ16Q9NPI9 418 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 DEPPQ9NTK1 212 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 EMCNQ9ULC0 261 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 OR10H1Q9Y4A9 318 aa12.36□□□□□ -0.43
COMMD3-205ENST00000463688 HRKO00198 91 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 PLOD2O00469 737 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 CBR3O75828 277 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 ABCB1P08183 1280 aaPredicted RBP12.35□□□□□ -0.43
COMMD3-205ENST00000463688 GDF1P27539 372 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 SSTR2P30874 369 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 PIGAP37287 484 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 ST13P50502 369 aaKnown RBP12.35□□□□□ -0.43
COMMD3-205ENST00000463688 MAD2L1Q13257 205 aaPredicted RBP12.35□□□□□ -0.43
COMMD3-205ENST00000463688 CYP27C1Q4G0S4 372 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 MYO7BQ6PIF6 2116 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 LYPD8Q6UX82 237 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 DGAT2L6Q6ZPD8 337 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 RPS27LQ71UM5 84 aaKnown RBP12.35□□□□□ -0.43
COMMD3-205ENST00000463688 TRABD2AQ86V40 505 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 C10orf107Q8IVU9 208 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 C4orf33Q8N1A6 199 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 OR1J4Q8NGS1 313 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 LILRB4Q8NHJ6 448 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 NEIL3Q8TAT5 605 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 EXOSC8Q96B26 276 aaKnown RBP12.35□□□□□ -0.43
COMMD3-205ENST00000463688 SDCCAG3Q96C92 435 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 C11orf24Q96F05 449 aaPredicted RBP12.35□□□□□ -0.43
COMMD3-205ENST00000463688 CNRIP1Q96F85 164 aaPredicted RBP12.35□□□□□ -0.43
COMMD3-205ENST00000463688 APIPQ96GX9 242 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 RILPQ96NA2 401 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 ZIM3Q96PE6 472 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 BTBD9Q96Q07 612 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 HBEGFQ99075 208 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 ZNF703Q9H7S9 590 aaPredicted RBP12.35□□□□□ -0.43
COMMD3-205ENST00000463688 Q9N2J8 555 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 ATAD3AQ9NVI7 634 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 TUBA8Q9NY65 449 aaPredicted RBP12.35□□□□□ -0.43
COMMD3-205ENST00000463688 STOML1Q9UBI4 398 aa12.35□□□□□ -0.43
COMMD3-205ENST00000463688 CNOT11Q9UKZ1 510 aaKnown RBP12.35□□□□□ -0.43
COMMD3-205ENST00000463688 GPR55Q9Y2T6 319 aaPredicted RBP12.35□□□□□ -0.43
COMMD3-205ENST00000463688 A0A1B0GTL3 188 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 WASHC1A8K0Z3 465 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 HSPB2A8KAH6 182 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 RGS16O15492 202 aaPredicted RBP12.34□□□□□ -0.43
COMMD3-205ENST00000463688 TRIM3O75382 744 aaPredicted RBP12.34□□□□□ -0.43
COMMD3-205ENST00000463688 LYPLA1O75608 230 aaPredicted RBP12.34□□□□□ -0.43
COMMD3-205ENST00000463688 REM1O75628 298 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 TRAPPC6AO75865 159 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 HSPA4LO95757 839 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 ACTL6AO96019 429 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 RNF224P0DH78 156 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 S1PR1P21453 382 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 CASP3P42574 277 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 NCBP2P52298 156 aaKnown RBP eCLIP12.34□□□□□ -0.43
COMMD3-205ENST00000463688 PNLIPRP2P54317 469 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 VSNL1P62760 191 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 HSPB2Q16082 182 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 ZNF628Q5EBL2 1059 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 PRAMEF20Q5VT98 475 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 TIGD3Q6B0B8 471 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 ZNF585AQ6P3V2 769 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 ENPP6Q6UWR7 440 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 AMER2Q8N7J2 671 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 ADCY4Q8NFM4 1077 aa12.34□□□□□ -0.43
COMMD3-205ENST00000463688 AENQ8WTP8 325 aaKnown RBP12.34□□□□□ -0.43
COMMD3-205ENST00000463688 OMA1Q96E52 524 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms