RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 PAGE2BQ5JRK9 111 aa14.27□□□□□ -0.13
SND1-203ENST00000463020 SHEQ5VZ18 495 aa14.27□□□□□ -0.13
SND1-203ENST00000463020 MED27Q6P2C8 311 aa14.27□□□□□ -0.13
SND1-203ENST00000463020 ADGRE4PQ86SQ3 457 aa14.27□□□□□ -0.13
SND1-203ENST00000463020 DND1Q8IYX4 353 aaKnown RBP14.27□□□□□ -0.13
SND1-203ENST00000463020 ZNF615Q8N8J6 731 aa14.27□□□□□ -0.13
SND1-203ENST00000463020 SRFBP1Q8NEF9 429 aaKnown RBP14.27□□□□□ -0.13
SND1-203ENST00000463020 INTS12Q96CB8 462 aaKnown RBP14.27□□□□□ -0.13
SND1-203ENST00000463020 CMTM7Q96FZ5 175 aa14.27□□□□□ -0.13
SND1-203ENST00000463020 ART5Q96L15 291 aa14.27□□□□□ -0.13
SND1-203ENST00000463020 DACH2Q96NX9 599 aa14.27□□□□□ -0.13
SND1-203ENST00000463020 CALHM2Q9HA72 323 aa14.27□□□□□ -0.13
SND1-203ENST00000463020 CXorf21Q9HAI6 301 aa14.27□□□□□ -0.13
SND1-203ENST00000463020 GALNT9Q9HCQ5 603 aa14.27□□□□□ -0.13
SND1-203ENST00000463020 INTS9Q9NV88 658 aaKnown RBP14.27□□□□□ -0.13
SND1-203ENST00000463020 LGALS13Q9UHV8 139 aa14.27□□□□□ -0.13
SND1-203ENST00000463020 RRP15Q9Y3B9 282 aaKnown RBP14.27□□□□□ -0.13
SND1-203ENST00000463020 TESMINQ9Y4I5 508 aa14.27□□□□□ -0.13
SND1-203ENST00000463020 DEFB108AA8MXU0 73 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 UBXN8O00124 270 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 CHN1P15882 459 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 MASP1P48740 699 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 STARP49675 285 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 RPS13P62277 151 aaKnown RBP14.26□□□□□ -0.13
SND1-203ENST00000463020 POU4F1Q01851 419 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 SRYQ05066 204 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 HIST2H2ACQ16777 129 aaPredicted RBP14.26□□□□□ -0.13
SND1-203ENST00000463020 CDKL4Q5MAI5 379 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 TIGD3Q6B0B8 471 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 HIST2H2AA3Q6FI13 130 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 GRHL2Q6ISB3 625 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 LRRC70Q7Z2Q7 622 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 CPLX4Q7Z7G2 160 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 ZCCHC7Q8N3Z6 543 aaKnown RBP14.26□□□□□ -0.13
SND1-203ENST00000463020 PPP1R14CQ8TAE6 165 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 TMEM41AQ96HV5 264 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 UBXN10Q96LJ8 280 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 HS3ST6Q96QI5 342 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 NODALQ96S42 347 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 NSRP1Q9H0G5 558 aaKnown RBP14.26□□□□□ -0.13
SND1-203ENST00000463020 RABEP2Q9H5N1 569 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 ALG9Q9H6U8 611 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 PRM3Q9NNZ6 103 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 RNF112Q9ULX5 631 aa14.26□□□□□ -0.13
SND1-203ENST00000463020 ARID1AO14497 2285 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 OR6C76A6NM76 312 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 C17orf51A8MQB3 221 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 E7ESA3 106 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 TP53I11O14683 189 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 TNFSF13O75888 250 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 SNX4O95219 450 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 ABCB1P08183 1280 aaPredicted RBP14.25□□□□□ -0.13
SND1-203ENST00000463020 NR2F6P10588 404 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 S1PR1P21453 382 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 ABCD3P28288 659 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 CCKARP32238 428 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 RAP1GDS1P52306 607 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 ZKSCAN8Q15776 578 aaPredicted RBP14.25□□□□□ -0.13
SND1-203ENST00000463020 TBCELQ5QJ74 424 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 ANGPTL8Q6UXH0 198 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 C22orf34Q6ZV56 151 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 CMC1Q7Z7K0 106 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 TAGAPQ8N103 731 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 ZPLD1Q8TCW7 415 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 SMPDL3BQ92485 455 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 HGDQ93099 445 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 RGMAQ96B86 450 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 LRRC39Q96DD0 335 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 ATOH8Q96SQ7 321 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 NXF5Q9H1B4 397 aaKnown RBP14.25□□□□□ -0.13
SND1-203ENST00000463020 SERHLQ9NQF3 203 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.25□□□□□ -0.134e-6■□□□□ 10.3
SND1-203ENST00000463020 EHD3Q9NZN3 535 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 CLCF1Q9UBD9 225 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 PHF11Q9UIL8 331 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 MAPRE3Q9UPY8 281 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 ACTL7BQ9Y614 415 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 HIVEP2P31629 2446 aa14.25□□□□□ -0.13
SND1-203ENST00000463020 EXOC1LA0A1B0GW35 172 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 SNPHO15079 494 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 DYRK3O43781 588 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 ERN1O75460 977 aaKnown RBP14.24□□□□□ -0.13
SND1-203ENST00000463020 TGM6O95932 706 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 FAM58BPP0C7Q3 252 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 SLC35E2BP0CK96 405 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 SLC35E2P0CK97 266 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 GPX3P22352 226 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 CNTFP26441 200 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 SSTR1P30872 391 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 CPOXP36551 454 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 CPA2P48052 419 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 NEK2P51955 445 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 SEC24CP53992 1094 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 PCDH1Q08174 1060 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 FAM27E3Q08E93 113 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 FUT7Q11130 342 aa14.24□□□□□ -0.13
SND1-203ENST00000463020 CXXC5Q7LFL8 322 aaKnown RBP14.24□□□□□ -0.13
SND1-203ENST00000463020 YTHDF3Q7Z739 585 aaKnown RBP14.24□□□□□ -0.13
SND1-203ENST00000463020 ISCA2Q86U28 154 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms